Gene : Lsat_1_v5_gn_0_10520 L. sativa V8
Defline:  (1 of 1) PTHR22778//PTHR22778:SF18 - OVARIAN CANCER GENE-2 PROTEIN-RELATED // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 8, CHLOROPLASTIC Genomic Order:  134
Name:  ? Lsat_1_v5_gn_0_10520 Secondary Identifier:  ? PAC:38936191
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_10520 0.5kb upstream 0.5kb upstream 2467   true Lsat_1_v8_lg_0: 13380956-13383422 Lactuca sativa
Lsat_1_v5_gn_0_10520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 13382923-13383422 Lactuca sativa
Lsat_1_v5_gn_0_10520 0.5kb downstream 0.5kb downstream 2467   true Lsat_1_v8_lg_0: 13380456-13382922 Lactuca sativa
Lsat_1_v5_gn_0_10520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 13380456-13380955 Lactuca sativa
Lsat_1_v5_gn_0_10520 1.0kb upstream 1.0kb upstream 2967   true Lsat_1_v8_lg_0: 13380956-13383922 Lactuca sativa
Lsat_1_v5_gn_0_10520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 13382923-13383922 Lactuca sativa
Lsat_1_v5_gn_0_10520 1.0kb downstream 1.0kb downstream 2967   true Lsat_1_v8_lg_0: 13379956-13382922 Lactuca sativa
Lsat_1_v5_gn_0_10520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 13379956-13380955 Lactuca sativa
Lsat_1_v5_gn_0_10520 2.0kb upstream 2.0kb upstream 3967   true Lsat_1_v8_lg_0: 13380956-13384922 Lactuca sativa
Lsat_1_v5_gn_0_10520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 13382923-13384922 Lactuca sativa
Lsat_1_v5_gn_0_10520 2.0kb downstream 2.0kb downstream 3967   true Lsat_1_v8_lg_0: 13378956-13382922 Lactuca sativa
Lsat_1_v5_gn_0_10520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 13378956-13380955 Lactuca sativa
Lsat_1_v5_gn_0_10520 5.0kb upstream 5.0kb upstream 6967   true Lsat_1_v8_lg_0: 13380956-13387922 Lactuca sativa
Lsat_1_v5_gn_0_10520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 13382923-13387922 Lactuca sativa
Lsat_1_v5_gn_0_10520 5.0kb downstream 5.0kb downstream 6967   true Lsat_1_v8_lg_0: 13375956-13382922 Lactuca sativa
Lsat_1_v5_gn_0_10520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 13375956-13380955 Lactuca sativa
Lsat_1_v5_gn_0_10520 10.0kb upstream 10.0kb upstream 11967   true Lsat_1_v8_lg_0: 13380956-13392922 Lactuca sativa
Lsat_1_v5_gn_0_10520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 13382923-13392922 Lactuca sativa
Lsat_1_v5_gn_0_10520 10.0kb downstream 10.0kb downstream 11967   true Lsat_1_v8_lg_0: 13370956-13382922 Lactuca sativa
Lsat_1_v5_gn_0_10520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 13370956-13380955 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466342 5263 Asterids View MSA
123736994 5271 Pentapetalae View MSA
122787979 5272 Eudicot View MSA
122046672 5273 Angiosperm View MSA
121346147 5274 Embryophyte View MSA
123427771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain