Gene : Lsat_1_v5_gn_0_10481 L. sativa V8
Defline:  (1 of 1) PTHR10314:SF79 - DOF-TYPE TRANSCRIPTION FACTOR TMO6 Genomic Order:  135
Name:  ? Lsat_1_v5_gn_0_10481 Secondary Identifier:  ? PAC:38936213
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_10481 0.5kb upstream 0.5kb upstream 3125   true Lsat_1_v8_lg_0: 13384401-13387525 Lactuca sativa
Lsat_1_v5_gn_0_10481 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 13384401-13384900 Lactuca sativa
Lsat_1_v5_gn_0_10481 0.5kb downstream 0.5kb downstream 3125   true Lsat_1_v8_lg_0: 13384901-13388025 Lactuca sativa
Lsat_1_v5_gn_0_10481 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 13387526-13388025 Lactuca sativa
Lsat_1_v5_gn_0_10481 1.0kb upstream 1.0kb upstream 3625   true Lsat_1_v8_lg_0: 13383901-13387525 Lactuca sativa
Lsat_1_v5_gn_0_10481 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 13383901-13384900 Lactuca sativa
Lsat_1_v5_gn_0_10481 1.0kb downstream 1.0kb downstream 3625   true Lsat_1_v8_lg_0: 13384901-13388525 Lactuca sativa
Lsat_1_v5_gn_0_10481 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 13387526-13388525 Lactuca sativa
Lsat_1_v5_gn_0_10481 2.0kb upstream 2.0kb upstream 4625   true Lsat_1_v8_lg_0: 13382901-13387525 Lactuca sativa
Lsat_1_v5_gn_0_10481 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 13382901-13384900 Lactuca sativa
Lsat_1_v5_gn_0_10481 2.0kb downstream 2.0kb downstream 4625   true Lsat_1_v8_lg_0: 13384901-13389525 Lactuca sativa
Lsat_1_v5_gn_0_10481 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 13387526-13389525 Lactuca sativa
Lsat_1_v5_gn_0_10481 5.0kb upstream 5.0kb upstream 7625   true Lsat_1_v8_lg_0: 13379901-13387525 Lactuca sativa
Lsat_1_v5_gn_0_10481 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 13379901-13384900 Lactuca sativa
Lsat_1_v5_gn_0_10481 5.0kb downstream 5.0kb downstream 7625   true Lsat_1_v8_lg_0: 13384901-13392525 Lactuca sativa
Lsat_1_v5_gn_0_10481 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 13387526-13392525 Lactuca sativa
Lsat_1_v5_gn_0_10481 10.0kb upstream 10.0kb upstream 12625   true Lsat_1_v8_lg_0: 13374901-13387525 Lactuca sativa
Lsat_1_v5_gn_0_10481 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 13374901-13384900 Lactuca sativa
Lsat_1_v5_gn_0_10481 10.0kb downstream 10.0kb downstream 12625   true Lsat_1_v8_lg_0: 13384901-13397525 Lactuca sativa
Lsat_1_v5_gn_0_10481 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 13387526-13397525 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474782 5263 Asterids View MSA
123740733 5271 Pentapetalae View MSA
122789564 5272 Eudicot View MSA
122051131 5273 Angiosperm View MSA
121346707 5274 Embryophyte View MSA
123428019 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain