Gene : Lsat_1_v5_gn_0_800 L. sativa V8
Defline:  (1 of 7) K14411 - RNA-binding protein Musashi (MSI) Genomic Order:  197
Name:  ? Lsat_1_v5_gn_0_800 Secondary Identifier:  ? PAC:38935880
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_800 0.5kb upstream 0.5kb upstream 3444   true Lsat_1_v8_lg_0: 17222229-17225672 Lactuca sativa
Lsat_1_v5_gn_0_800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 17225173-17225672 Lactuca sativa
Lsat_1_v5_gn_0_800 0.5kb downstream 0.5kb downstream 3444   true Lsat_1_v8_lg_0: 17221729-17225172 Lactuca sativa
Lsat_1_v5_gn_0_800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 17221729-17222228 Lactuca sativa
Lsat_1_v5_gn_0_800 1.0kb upstream 1.0kb upstream 3944   true Lsat_1_v8_lg_0: 17222229-17226172 Lactuca sativa
Lsat_1_v5_gn_0_800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 17225173-17226172 Lactuca sativa
Lsat_1_v5_gn_0_800 1.0kb downstream 1.0kb downstream 3944   true Lsat_1_v8_lg_0: 17221229-17225172 Lactuca sativa
Lsat_1_v5_gn_0_800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 17221229-17222228 Lactuca sativa
Lsat_1_v5_gn_0_800 2.0kb upstream 2.0kb upstream 4944   true Lsat_1_v8_lg_0: 17222229-17227172 Lactuca sativa
Lsat_1_v5_gn_0_800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 17225173-17227172 Lactuca sativa
Lsat_1_v5_gn_0_800 2.0kb downstream 2.0kb downstream 4944   true Lsat_1_v8_lg_0: 17220229-17225172 Lactuca sativa
Lsat_1_v5_gn_0_800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 17220229-17222228 Lactuca sativa
Lsat_1_v5_gn_0_800 5.0kb upstream 5.0kb upstream 7944   true Lsat_1_v8_lg_0: 17222229-17230172 Lactuca sativa
Lsat_1_v5_gn_0_800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 17225173-17230172 Lactuca sativa
Lsat_1_v5_gn_0_800 5.0kb downstream 5.0kb downstream 7944   true Lsat_1_v8_lg_0: 17217229-17225172 Lactuca sativa
Lsat_1_v5_gn_0_800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 17217229-17222228 Lactuca sativa
Lsat_1_v5_gn_0_800 10.0kb upstream 10.0kb upstream 12944   true Lsat_1_v8_lg_0: 17222229-17235172 Lactuca sativa
Lsat_1_v5_gn_0_800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 17225173-17235172 Lactuca sativa
Lsat_1_v5_gn_0_800 10.0kb downstream 10.0kb downstream 12944   true Lsat_1_v8_lg_0: 17212229-17225172 Lactuca sativa
Lsat_1_v5_gn_0_800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 17212229-17222228 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471152 5263 Asterids View MSA
123742464 5271 Pentapetalae View MSA
122794211 5272 Eudicot View MSA
122048542 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain