Gene : Lsat_1_v5_gn_3_53060 L. sativa V8
Defline:  (1 of 2) PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  21
Name:  ? Lsat_1_v5_gn_3_53060 Secondary Identifier:  ? PAC:38936401
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_53060 0.5kb upstream 0.5kb upstream 3341   true Lsat_1_v8_lg_0: 762100-765440 Lactuca sativa
Lsat_1_v5_gn_3_53060 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 764941-765440 Lactuca sativa
Lsat_1_v5_gn_3_53060 0.5kb downstream 0.5kb downstream 3341   true Lsat_1_v8_lg_0: 761600-764940 Lactuca sativa
Lsat_1_v5_gn_3_53060 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 761600-762099 Lactuca sativa
Lsat_1_v5_gn_3_53060 1.0kb upstream 1.0kb upstream 3841   true Lsat_1_v8_lg_0: 762100-765940 Lactuca sativa
Lsat_1_v5_gn_3_53060 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 764941-765940 Lactuca sativa
Lsat_1_v5_gn_3_53060 1.0kb downstream 1.0kb downstream 3841   true Lsat_1_v8_lg_0: 761100-764940 Lactuca sativa
Lsat_1_v5_gn_3_53060 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 761100-762099 Lactuca sativa
Lsat_1_v5_gn_3_53060 2.0kb upstream 2.0kb upstream 4841   true Lsat_1_v8_lg_0: 762100-766940 Lactuca sativa
Lsat_1_v5_gn_3_53060 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 764941-766940 Lactuca sativa
Lsat_1_v5_gn_3_53060 2.0kb downstream 2.0kb downstream 4841   true Lsat_1_v8_lg_0: 760100-764940 Lactuca sativa
Lsat_1_v5_gn_3_53060 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 760100-762099 Lactuca sativa
Lsat_1_v5_gn_3_53060 5.0kb upstream 5.0kb upstream 7841   true Lsat_1_v8_lg_0: 762100-769940 Lactuca sativa
Lsat_1_v5_gn_3_53060 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 764941-769940 Lactuca sativa
Lsat_1_v5_gn_3_53060 5.0kb downstream 5.0kb downstream 7841   true Lsat_1_v8_lg_0: 757100-764940 Lactuca sativa
Lsat_1_v5_gn_3_53060 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 757100-762099 Lactuca sativa
Lsat_1_v5_gn_3_53060 10.0kb upstream 10.0kb upstream 12841   true Lsat_1_v8_lg_0: 762100-774940 Lactuca sativa
Lsat_1_v5_gn_3_53060 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 764941-774940 Lactuca sativa
Lsat_1_v5_gn_3_53060 10.0kb downstream 10.0kb downstream 12841   true Lsat_1_v8_lg_0: 752100-764940 Lactuca sativa
Lsat_1_v5_gn_3_53060 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 752100-762099 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470517 5263 Asterids View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain