Gene : Lsat_1_v5_gn_4_76860 L. sativa V8
Defline:  (1 of 2) PTHR12606//PTHR12606:SF38 - SENTRIN/SUMO-SPECIFIC PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  493
Name:  ? Lsat_1_v5_gn_4_76860 Secondary Identifier:  ? PAC:38936437
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_76860 0.5kb upstream 0.5kb upstream 3767   true Lsat_1_v8_lg_0: 55945752-55949518 Lactuca sativa
Lsat_1_v5_gn_4_76860 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 55945752-55946251 Lactuca sativa
Lsat_1_v5_gn_4_76860 0.5kb downstream 0.5kb downstream 3767   true Lsat_1_v8_lg_0: 55946252-55950018 Lactuca sativa
Lsat_1_v5_gn_4_76860 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 55949519-55950018 Lactuca sativa
Lsat_1_v5_gn_4_76860 1.0kb upstream 1.0kb upstream 4267   true Lsat_1_v8_lg_0: 55945252-55949518 Lactuca sativa
Lsat_1_v5_gn_4_76860 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 55945252-55946251 Lactuca sativa
Lsat_1_v5_gn_4_76860 1.0kb downstream 1.0kb downstream 4267   true Lsat_1_v8_lg_0: 55946252-55950518 Lactuca sativa
Lsat_1_v5_gn_4_76860 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 55949519-55950518 Lactuca sativa
Lsat_1_v5_gn_4_76860 2.0kb upstream 2.0kb upstream 5267   true Lsat_1_v8_lg_0: 55944252-55949518 Lactuca sativa
Lsat_1_v5_gn_4_76860 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 55944252-55946251 Lactuca sativa
Lsat_1_v5_gn_4_76860 2.0kb downstream 2.0kb downstream 5267   true Lsat_1_v8_lg_0: 55946252-55951518 Lactuca sativa
Lsat_1_v5_gn_4_76860 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 55949519-55951518 Lactuca sativa
Lsat_1_v5_gn_4_76860 5.0kb upstream 5.0kb upstream 8267   true Lsat_1_v8_lg_0: 55941252-55949518 Lactuca sativa
Lsat_1_v5_gn_4_76860 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 55941252-55946251 Lactuca sativa
Lsat_1_v5_gn_4_76860 5.0kb downstream 5.0kb downstream 8267   true Lsat_1_v8_lg_0: 55946252-55954518 Lactuca sativa
Lsat_1_v5_gn_4_76860 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 55949519-55954518 Lactuca sativa
Lsat_1_v5_gn_4_76860 10.0kb upstream 10.0kb upstream 13267   true Lsat_1_v8_lg_0: 55936252-55949518 Lactuca sativa
Lsat_1_v5_gn_4_76860 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 55936252-55946251 Lactuca sativa
Lsat_1_v5_gn_4_76860 10.0kb downstream 10.0kb downstream 13267   true Lsat_1_v8_lg_0: 55946252-55959518 Lactuca sativa
Lsat_1_v5_gn_4_76860 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 55949519-55959518 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480457 5263 Asterids View MSA
123753730 5271 Pentapetalae View MSA
122794426 5272 Eudicot View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain