Gene : Lsat_1_v5_gn_9_117900 L. sativa V8
Defline:  (1 of 3) PTHR19139//PTHR19139:SF142 - AQUAPORIN TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  411
Name:  ? Lsat_1_v5_gn_9_117900 Secondary Identifier:  ? PAC:38935533
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_117900 0.5kb upstream 0.5kb upstream 2471   true Lsat_1_v8_lg_0: 46312796-46315266 Lactuca sativa
Lsat_1_v5_gn_9_117900 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 46312796-46313295 Lactuca sativa
Lsat_1_v5_gn_9_117900 0.5kb downstream 0.5kb downstream 2471   true Lsat_1_v8_lg_0: 46313296-46315766 Lactuca sativa
Lsat_1_v5_gn_9_117900 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 46315267-46315766 Lactuca sativa
Lsat_1_v5_gn_9_117900 1.0kb upstream 1.0kb upstream 2971   true Lsat_1_v8_lg_0: 46312296-46315266 Lactuca sativa
Lsat_1_v5_gn_9_117900 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 46312296-46313295 Lactuca sativa
Lsat_1_v5_gn_9_117900 1.0kb downstream 1.0kb downstream 2971   true Lsat_1_v8_lg_0: 46313296-46316266 Lactuca sativa
Lsat_1_v5_gn_9_117900 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 46315267-46316266 Lactuca sativa
Lsat_1_v5_gn_9_117900 2.0kb upstream 2.0kb upstream 3971   true Lsat_1_v8_lg_0: 46311296-46315266 Lactuca sativa
Lsat_1_v5_gn_9_117900 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 46311296-46313295 Lactuca sativa
Lsat_1_v5_gn_9_117900 2.0kb downstream 2.0kb downstream 3971   true Lsat_1_v8_lg_0: 46313296-46317266 Lactuca sativa
Lsat_1_v5_gn_9_117900 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 46315267-46317266 Lactuca sativa
Lsat_1_v5_gn_9_117900 5.0kb upstream 5.0kb upstream 6971   true Lsat_1_v8_lg_0: 46308296-46315266 Lactuca sativa
Lsat_1_v5_gn_9_117900 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 46308296-46313295 Lactuca sativa
Lsat_1_v5_gn_9_117900 5.0kb downstream 5.0kb downstream 6971   true Lsat_1_v8_lg_0: 46313296-46320266 Lactuca sativa
Lsat_1_v5_gn_9_117900 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 46315267-46320266 Lactuca sativa
Lsat_1_v5_gn_9_117900 10.0kb upstream 10.0kb upstream 11971   true Lsat_1_v8_lg_0: 46303296-46315266 Lactuca sativa
Lsat_1_v5_gn_9_117900 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 46303296-46313295 Lactuca sativa
Lsat_1_v5_gn_9_117900 10.0kb downstream 10.0kb downstream 11971   true Lsat_1_v8_lg_0: 46313296-46325266 Lactuca sativa
Lsat_1_v5_gn_9_117900 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 46315267-46325266 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466974 5263 Asterids View MSA
123748349 5271 Pentapetalae View MSA
122794244 5272 Eudicot View MSA
122048771 5273 Angiosperm View MSA
121349244 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain