Gene : Lsat_1_v5_gn_0_25980 L. sativa V8
Defline:  (1 of 4) PTHR32409//PTHR32409:SF3 - FAMILY NOT NAMED // MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED Genomic Order:  501
Name:  ? Lsat_1_v5_gn_0_25980 Secondary Identifier:  ? PAC:38936370
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_25980 0.5kb upstream 0.5kb upstream 2796   true Lsat_1_v8_lg_0: 56597423-56600218 Lactuca sativa
Lsat_1_v5_gn_0_25980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 56597423-56597922 Lactuca sativa
Lsat_1_v5_gn_0_25980 0.5kb downstream 0.5kb downstream 2796   true Lsat_1_v8_lg_0: 56597923-56600718 Lactuca sativa
Lsat_1_v5_gn_0_25980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 56600219-56600718 Lactuca sativa
Lsat_1_v5_gn_0_25980 1.0kb upstream 1.0kb upstream 3296   true Lsat_1_v8_lg_0: 56596923-56600218 Lactuca sativa
Lsat_1_v5_gn_0_25980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 56596923-56597922 Lactuca sativa
Lsat_1_v5_gn_0_25980 1.0kb downstream 1.0kb downstream 3296   true Lsat_1_v8_lg_0: 56597923-56601218 Lactuca sativa
Lsat_1_v5_gn_0_25980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 56600219-56601218 Lactuca sativa
Lsat_1_v5_gn_0_25980 2.0kb upstream 2.0kb upstream 4296   true Lsat_1_v8_lg_0: 56595923-56600218 Lactuca sativa
Lsat_1_v5_gn_0_25980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 56595923-56597922 Lactuca sativa
Lsat_1_v5_gn_0_25980 2.0kb downstream 2.0kb downstream 4296   true Lsat_1_v8_lg_0: 56597923-56602218 Lactuca sativa
Lsat_1_v5_gn_0_25980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 56600219-56602218 Lactuca sativa
Lsat_1_v5_gn_0_25980 5.0kb upstream 5.0kb upstream 7296   true Lsat_1_v8_lg_0: 56592923-56600218 Lactuca sativa
Lsat_1_v5_gn_0_25980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 56592923-56597922 Lactuca sativa
Lsat_1_v5_gn_0_25980 5.0kb downstream 5.0kb downstream 7296   true Lsat_1_v8_lg_0: 56597923-56605218 Lactuca sativa
Lsat_1_v5_gn_0_25980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 56600219-56605218 Lactuca sativa
Lsat_1_v5_gn_0_25980 10.0kb upstream 10.0kb upstream 12296   true Lsat_1_v8_lg_0: 56587923-56600218 Lactuca sativa
Lsat_1_v5_gn_0_25980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 56587923-56597922 Lactuca sativa
Lsat_1_v5_gn_0_25980 10.0kb downstream 10.0kb downstream 12296   true Lsat_1_v8_lg_0: 56597923-56610218 Lactuca sativa
Lsat_1_v5_gn_0_25980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 56600219-56610218 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026369 5273 Angiosperm View MSA
121474975 5263 Asterids View MSA
123751692 5271 Pentapetalae View MSA
122795762 5272 Eudicot View MSA
121344161 5274 Embryophyte View MSA
123425894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain