Gene : Lsat_1_v5_gn_0_29301 L. sativa V8
Defline:  (1 of 2) PTHR23068//PTHR23068:SF12 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED // SUBFAMILY NOT NAMED Genomic Order:  545
Name:  ? Lsat_1_v5_gn_0_29301 Secondary Identifier:  ? PAC:38936180
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_29301 0.5kb upstream 0.5kb upstream 9485   true Lsat_1_v8_lg_0: 63627978-63637462 Lactuca sativa
Lsat_1_v5_gn_0_29301 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 63627978-63628477 Lactuca sativa
Lsat_1_v5_gn_0_29301 0.5kb downstream 0.5kb downstream 9485   true Lsat_1_v8_lg_0: 63628478-63637962 Lactuca sativa
Lsat_1_v5_gn_0_29301 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 63637463-63637962 Lactuca sativa
Lsat_1_v5_gn_0_29301 1.0kb upstream 1.0kb upstream 9985   true Lsat_1_v8_lg_0: 63627478-63637462 Lactuca sativa
Lsat_1_v5_gn_0_29301 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 63627478-63628477 Lactuca sativa
Lsat_1_v5_gn_0_29301 1.0kb downstream 1.0kb downstream 9985   true Lsat_1_v8_lg_0: 63628478-63638462 Lactuca sativa
Lsat_1_v5_gn_0_29301 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 63637463-63638462 Lactuca sativa
Lsat_1_v5_gn_0_29301 2.0kb upstream 2.0kb upstream 10985   true Lsat_1_v8_lg_0: 63626478-63637462 Lactuca sativa
Lsat_1_v5_gn_0_29301 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 63626478-63628477 Lactuca sativa
Lsat_1_v5_gn_0_29301 2.0kb downstream 2.0kb downstream 10985   true Lsat_1_v8_lg_0: 63628478-63639462 Lactuca sativa
Lsat_1_v5_gn_0_29301 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 63637463-63639462 Lactuca sativa
Lsat_1_v5_gn_0_29301 5.0kb upstream 5.0kb upstream 13985   true Lsat_1_v8_lg_0: 63623478-63637462 Lactuca sativa
Lsat_1_v5_gn_0_29301 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 63623478-63628477 Lactuca sativa
Lsat_1_v5_gn_0_29301 5.0kb downstream 5.0kb downstream 13985   true Lsat_1_v8_lg_0: 63628478-63642462 Lactuca sativa
Lsat_1_v5_gn_0_29301 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 63637463-63642462 Lactuca sativa
Lsat_1_v5_gn_0_29301 10.0kb upstream 10.0kb upstream 18985   true Lsat_1_v8_lg_0: 63618478-63637462 Lactuca sativa
Lsat_1_v5_gn_0_29301 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 63618478-63628477 Lactuca sativa
Lsat_1_v5_gn_0_29301 10.0kb downstream 10.0kb downstream 18985   true Lsat_1_v8_lg_0: 63628478-63647462 Lactuca sativa
Lsat_1_v5_gn_0_29301 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 63637463-63647462 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475293 5263 Asterids View MSA
123745189 5271 Pentapetalae View MSA
122788994 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain