Gene : Lsat_1_v5_gn_0_32160 L. sativa V8
Defline:  (1 of 3) PF07223 - Protein of unknown function (DUF1421) (DUF1421) Genomic Order:  400
Name:  ? Lsat_1_v5_gn_0_32160 Secondary Identifier:  ? PAC:38935654
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_32160 0.5kb upstream 0.5kb upstream 3000   true Lsat_1_v8_lg_0: 42348580-42351579 Lactuca sativa
Lsat_1_v5_gn_0_32160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 42348580-42349079 Lactuca sativa
Lsat_1_v5_gn_0_32160 0.5kb downstream 0.5kb downstream 3000   true Lsat_1_v8_lg_0: 42349080-42352079 Lactuca sativa
Lsat_1_v5_gn_0_32160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 42351580-42352079 Lactuca sativa
Lsat_1_v5_gn_0_32160 1.0kb upstream 1.0kb upstream 3500   true Lsat_1_v8_lg_0: 42348080-42351579 Lactuca sativa
Lsat_1_v5_gn_0_32160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 42348080-42349079 Lactuca sativa
Lsat_1_v5_gn_0_32160 1.0kb downstream 1.0kb downstream 3500   true Lsat_1_v8_lg_0: 42349080-42352579 Lactuca sativa
Lsat_1_v5_gn_0_32160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 42351580-42352579 Lactuca sativa
Lsat_1_v5_gn_0_32160 2.0kb upstream 2.0kb upstream 4500   true Lsat_1_v8_lg_0: 42347080-42351579 Lactuca sativa
Lsat_1_v5_gn_0_32160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 42347080-42349079 Lactuca sativa
Lsat_1_v5_gn_0_32160 2.0kb downstream 2.0kb downstream 4500   true Lsat_1_v8_lg_0: 42349080-42353579 Lactuca sativa
Lsat_1_v5_gn_0_32160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 42351580-42353579 Lactuca sativa
Lsat_1_v5_gn_0_32160 5.0kb upstream 5.0kb upstream 7500   true Lsat_1_v8_lg_0: 42344080-42351579 Lactuca sativa
Lsat_1_v5_gn_0_32160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 42344080-42349079 Lactuca sativa
Lsat_1_v5_gn_0_32160 5.0kb downstream 5.0kb downstream 7500   true Lsat_1_v8_lg_0: 42349080-42356579 Lactuca sativa
Lsat_1_v5_gn_0_32160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 42351580-42356579 Lactuca sativa
Lsat_1_v5_gn_0_32160 10.0kb upstream 10.0kb upstream 12500   true Lsat_1_v8_lg_0: 42339080-42351579 Lactuca sativa
Lsat_1_v5_gn_0_32160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 42339080-42349079 Lactuca sativa
Lsat_1_v5_gn_0_32160 10.0kb downstream 10.0kb downstream 12500   true Lsat_1_v8_lg_0: 42349080-42361579 Lactuca sativa
Lsat_1_v5_gn_0_32160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 42351580-42361579 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467897 5263 Asterids View MSA
123737243 5271 Pentapetalae View MSA
122792477 5272 Eudicot View MSA
122050948 5273 Angiosperm View MSA
121350556 5274 Embryophyte View MSA
123427524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain