Gene : Lsat_1_v5_gn_0_3201 L. sativa V8
Defline:  (1 of 1) PTHR24220:SF511 - ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC Genomic Order:  522
Name:  ? Lsat_1_v5_gn_0_3201 Secondary Identifier:  ? PAC:38935469
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_3201 0.5kb upstream 0.5kb upstream 8453   true Lsat_1_v8_lg_0: 58423436-58431888 Lactuca sativa
Lsat_1_v5_gn_0_3201 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 58431389-58431888 Lactuca sativa
Lsat_1_v5_gn_0_3201 0.5kb downstream 0.5kb downstream 8453   true Lsat_1_v8_lg_0: 58422936-58431388 Lactuca sativa
Lsat_1_v5_gn_0_3201 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 58422936-58423435 Lactuca sativa
Lsat_1_v5_gn_0_3201 1.0kb upstream 1.0kb upstream 8953   true Lsat_1_v8_lg_0: 58423436-58432388 Lactuca sativa
Lsat_1_v5_gn_0_3201 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 58431389-58432388 Lactuca sativa
Lsat_1_v5_gn_0_3201 1.0kb downstream 1.0kb downstream 8953   true Lsat_1_v8_lg_0: 58422436-58431388 Lactuca sativa
Lsat_1_v5_gn_0_3201 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 58422436-58423435 Lactuca sativa
Lsat_1_v5_gn_0_3201 2.0kb upstream 2.0kb upstream 9953   true Lsat_1_v8_lg_0: 58423436-58433388 Lactuca sativa
Lsat_1_v5_gn_0_3201 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 58431389-58433388 Lactuca sativa
Lsat_1_v5_gn_0_3201 2.0kb downstream 2.0kb downstream 9953   true Lsat_1_v8_lg_0: 58421436-58431388 Lactuca sativa
Lsat_1_v5_gn_0_3201 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 58421436-58423435 Lactuca sativa
Lsat_1_v5_gn_0_3201 5.0kb upstream 5.0kb upstream 12953   true Lsat_1_v8_lg_0: 58423436-58436388 Lactuca sativa
Lsat_1_v5_gn_0_3201 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 58431389-58436388 Lactuca sativa
Lsat_1_v5_gn_0_3201 5.0kb downstream 5.0kb downstream 12953   true Lsat_1_v8_lg_0: 58418436-58431388 Lactuca sativa
Lsat_1_v5_gn_0_3201 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 58418436-58423435 Lactuca sativa
Lsat_1_v5_gn_0_3201 10.0kb upstream 10.0kb upstream 17953   true Lsat_1_v8_lg_0: 58423436-58441388 Lactuca sativa
Lsat_1_v5_gn_0_3201 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 58431389-58441388 Lactuca sativa
Lsat_1_v5_gn_0_3201 10.0kb downstream 10.0kb downstream 17953   true Lsat_1_v8_lg_0: 58413436-58431388 Lactuca sativa
Lsat_1_v5_gn_0_3201 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 58413436-58423435 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121440383 5263 Asterids Singleton cluster - no MSA
123753712 5271 Pentapetalae View MSA
122775213 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain