Gene : Lsat_1_v5_gn_0_32461 L. sativa V8
Defline:  (1 of 3) 2.7.1.21 - Thymidine kinase Genomic Order:  45
Name:  ? Lsat_1_v5_gn_0_32461 Secondary Identifier:  ? PAC:38935934
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7199 Lactuca sativa pathologic  
Lsativa PWY-7200 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_32461 0.5kb upstream 0.5kb upstream 13168   true Lsat_1_v8_lg_0: 5094580-5107747 Lactuca sativa
Lsat_1_v5_gn_0_32461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 5094580-5095079 Lactuca sativa
Lsat_1_v5_gn_0_32461 0.5kb downstream 0.5kb downstream 13168   true Lsat_1_v8_lg_0: 5095080-5108247 Lactuca sativa
Lsat_1_v5_gn_0_32461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 5107748-5108247 Lactuca sativa
Lsat_1_v5_gn_0_32461 1.0kb upstream 1.0kb upstream 13668   true Lsat_1_v8_lg_0: 5094080-5107747 Lactuca sativa
Lsat_1_v5_gn_0_32461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 5094080-5095079 Lactuca sativa
Lsat_1_v5_gn_0_32461 1.0kb downstream 1.0kb downstream 13668   true Lsat_1_v8_lg_0: 5095080-5108747 Lactuca sativa
Lsat_1_v5_gn_0_32461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 5107748-5108747 Lactuca sativa
Lsat_1_v5_gn_0_32461 2.0kb upstream 2.0kb upstream 14668   true Lsat_1_v8_lg_0: 5093080-5107747 Lactuca sativa
Lsat_1_v5_gn_0_32461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 5093080-5095079 Lactuca sativa
Lsat_1_v5_gn_0_32461 2.0kb downstream 2.0kb downstream 14668   true Lsat_1_v8_lg_0: 5095080-5109747 Lactuca sativa
Lsat_1_v5_gn_0_32461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 5107748-5109747 Lactuca sativa
Lsat_1_v5_gn_0_32461 5.0kb upstream 5.0kb upstream 17668   true Lsat_1_v8_lg_0: 5090080-5107747 Lactuca sativa
Lsat_1_v5_gn_0_32461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 5090080-5095079 Lactuca sativa
Lsat_1_v5_gn_0_32461 5.0kb downstream 5.0kb downstream 17668   true Lsat_1_v8_lg_0: 5095080-5112747 Lactuca sativa
Lsat_1_v5_gn_0_32461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 5107748-5112747 Lactuca sativa
Lsat_1_v5_gn_0_32461 10.0kb upstream 10.0kb upstream 22668   true Lsat_1_v8_lg_0: 5085080-5107747 Lactuca sativa
Lsat_1_v5_gn_0_32461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 5085080-5095079 Lactuca sativa
Lsat_1_v5_gn_0_32461 10.0kb downstream 10.0kb downstream 22668   true Lsat_1_v8_lg_0: 5095080-5117747 Lactuca sativa
Lsat_1_v5_gn_0_32461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 5107748-5117747 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121440475 5263 Asterids Singleton cluster - no MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain