Gene : Lsat_1_v5_gn_0_42100 L. sativa V8
Defline:  (1 of 9) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Genomic Order:  674
Name:  ? Lsat_1_v5_gn_0_42100 Secondary Identifier:  ? PAC:38936395
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_42100 0.5kb upstream 0.5kb upstream 4404   true Lsat_1_v8_lg_0: 87330484-87334887 Lactuca sativa
Lsat_1_v5_gn_0_42100 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 87330484-87330983 Lactuca sativa
Lsat_1_v5_gn_0_42100 0.5kb downstream 0.5kb downstream 4404   true Lsat_1_v8_lg_0: 87330984-87335387 Lactuca sativa
Lsat_1_v5_gn_0_42100 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 87334888-87335387 Lactuca sativa
Lsat_1_v5_gn_0_42100 1.0kb upstream 1.0kb upstream 4904   true Lsat_1_v8_lg_0: 87329984-87334887 Lactuca sativa
Lsat_1_v5_gn_0_42100 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 87329984-87330983 Lactuca sativa
Lsat_1_v5_gn_0_42100 1.0kb downstream 1.0kb downstream 4904   true Lsat_1_v8_lg_0: 87330984-87335887 Lactuca sativa
Lsat_1_v5_gn_0_42100 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 87334888-87335887 Lactuca sativa
Lsat_1_v5_gn_0_42100 2.0kb upstream 2.0kb upstream 5904   true Lsat_1_v8_lg_0: 87328984-87334887 Lactuca sativa
Lsat_1_v5_gn_0_42100 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 87328984-87330983 Lactuca sativa
Lsat_1_v5_gn_0_42100 2.0kb downstream 2.0kb downstream 5904   true Lsat_1_v8_lg_0: 87330984-87336887 Lactuca sativa
Lsat_1_v5_gn_0_42100 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 87334888-87336887 Lactuca sativa
Lsat_1_v5_gn_0_42100 5.0kb upstream 5.0kb upstream 8904   true Lsat_1_v8_lg_0: 87325984-87334887 Lactuca sativa
Lsat_1_v5_gn_0_42100 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 87325984-87330983 Lactuca sativa
Lsat_1_v5_gn_0_42100 5.0kb downstream 5.0kb downstream 8904   true Lsat_1_v8_lg_0: 87330984-87339887 Lactuca sativa
Lsat_1_v5_gn_0_42100 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 87334888-87339887 Lactuca sativa
Lsat_1_v5_gn_0_42100 10.0kb upstream 10.0kb upstream 13904   true Lsat_1_v8_lg_0: 87320984-87334887 Lactuca sativa
Lsat_1_v5_gn_0_42100 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 87320984-87330983 Lactuca sativa
Lsat_1_v5_gn_0_42100 10.0kb downstream 10.0kb downstream 13904   true Lsat_1_v8_lg_0: 87330984-87344887 Lactuca sativa
Lsat_1_v5_gn_0_42100 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 87334888-87344887 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041284 5273 Angiosperm View MSA
121469728 5263 Asterids View MSA
123742402 5271 Pentapetalae View MSA
122770282 5272 Eudicot View MSA
121349766 5274 Embryophyte View MSA
123381435 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain