Gene : Lsat_1_v5_gn_0_45340 L. sativa V8
Defline:  (1 of 3) PTHR22601:SF11 - OLIGOPEPTIDE TRANSPORTER 4 Genomic Order:  604
Name:  ? Lsat_1_v5_gn_0_45340 Secondary Identifier:  ? PAC:38935607
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_45340 0.5kb upstream 0.5kb upstream 1100   true Lsat_1_v8_lg_0: 73012435-73013534 Lactuca sativa
Lsat_1_v5_gn_0_45340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 73013035-73013534 Lactuca sativa
Lsat_1_v5_gn_0_45340 0.5kb downstream 0.5kb downstream 1100   true Lsat_1_v8_lg_0: 73011935-73013034 Lactuca sativa
Lsat_1_v5_gn_0_45340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 73011935-73012434 Lactuca sativa
Lsat_1_v5_gn_0_45340 1.0kb upstream 1.0kb upstream 1600   true Lsat_1_v8_lg_0: 73012435-73014034 Lactuca sativa
Lsat_1_v5_gn_0_45340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 73013035-73014034 Lactuca sativa
Lsat_1_v5_gn_0_45340 1.0kb downstream 1.0kb downstream 1600   true Lsat_1_v8_lg_0: 73011435-73013034 Lactuca sativa
Lsat_1_v5_gn_0_45340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 73011435-73012434 Lactuca sativa
Lsat_1_v5_gn_0_45340 2.0kb upstream 2.0kb upstream 2600   true Lsat_1_v8_lg_0: 73012435-73015034 Lactuca sativa
Lsat_1_v5_gn_0_45340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 73013035-73015034 Lactuca sativa
Lsat_1_v5_gn_0_45340 2.0kb downstream 2.0kb downstream 2600   true Lsat_1_v8_lg_0: 73010435-73013034 Lactuca sativa
Lsat_1_v5_gn_0_45340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 73010435-73012434 Lactuca sativa
Lsat_1_v5_gn_0_45340 5.0kb upstream 5.0kb upstream 5600   true Lsat_1_v8_lg_0: 73012435-73018034 Lactuca sativa
Lsat_1_v5_gn_0_45340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 73013035-73018034 Lactuca sativa
Lsat_1_v5_gn_0_45340 5.0kb downstream 5.0kb downstream 5600   true Lsat_1_v8_lg_0: 73007435-73013034 Lactuca sativa
Lsat_1_v5_gn_0_45340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 73007435-73012434 Lactuca sativa
Lsat_1_v5_gn_0_45340 10.0kb upstream 10.0kb upstream 10600   true Lsat_1_v8_lg_0: 73012435-73023034 Lactuca sativa
Lsat_1_v5_gn_0_45340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 73013035-73023034 Lactuca sativa
Lsat_1_v5_gn_0_45340 10.0kb downstream 10.0kb downstream 10600   true Lsat_1_v8_lg_0: 73002435-73013034 Lactuca sativa
Lsat_1_v5_gn_0_45340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 73002435-73012434 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477488 5263 Asterids View MSA
123753385 5271 Pentapetalae View MSA
122775084 5272 Eudicot View MSA
122048863 5273 Angiosperm View MSA
121311143 5274 Embryophyte View MSA
123348480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain