Gene : Lsat_1_v5_gn_1_121600 L. sativa V8

Defline:  (1 of 2) PTHR33199//PTHR33199:SF8 - FAMILY NOT NAMED // MACPF DOMAIN-CONTAINING PROTEIN NSL1 Genomic Order:  3762
Name:  ? Lsat_1_v5_gn_1_121600 Secondary Identifier:  ? PAC:38948742

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_121600 0.5kb upstream 0.5kb upstream 4912   true Lsat_1_v8_lg_1: 195379072-195383983 Lactuca sativa
Lsat_1_v5_gn_1_121600 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 195379072-195379571 Lactuca sativa
Lsat_1_v5_gn_1_121600 0.5kb downstream 0.5kb downstream 4912   true Lsat_1_v8_lg_1: 195379572-195384483 Lactuca sativa
Lsat_1_v5_gn_1_121600 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 195383984-195384483 Lactuca sativa
Lsat_1_v5_gn_1_121600 1.0kb upstream 1.0kb upstream 5412   true Lsat_1_v8_lg_1: 195378572-195383983 Lactuca sativa
Lsat_1_v5_gn_1_121600 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 195378572-195379571 Lactuca sativa
Lsat_1_v5_gn_1_121600 1.0kb downstream 1.0kb downstream 5412   true Lsat_1_v8_lg_1: 195379572-195384983 Lactuca sativa
Lsat_1_v5_gn_1_121600 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 195383984-195384983 Lactuca sativa
Lsat_1_v5_gn_1_121600 2.0kb upstream 2.0kb upstream 6412   true Lsat_1_v8_lg_1: 195377572-195383983 Lactuca sativa
Lsat_1_v5_gn_1_121600 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 195377572-195379571 Lactuca sativa
Lsat_1_v5_gn_1_121600 2.0kb downstream 2.0kb downstream 6412   true Lsat_1_v8_lg_1: 195379572-195385983 Lactuca sativa
Lsat_1_v5_gn_1_121600 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 195383984-195385983 Lactuca sativa
Lsat_1_v5_gn_1_121600 5.0kb upstream 5.0kb upstream 9412   true Lsat_1_v8_lg_1: 195374572-195383983 Lactuca sativa
Lsat_1_v5_gn_1_121600 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 195374572-195379571 Lactuca sativa
Lsat_1_v5_gn_1_121600 5.0kb downstream 5.0kb downstream 9412   true Lsat_1_v8_lg_1: 195379572-195388983 Lactuca sativa
Lsat_1_v5_gn_1_121600 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 195383984-195388983 Lactuca sativa
Lsat_1_v5_gn_1_121600 10.0kb upstream 10.0kb upstream 14412   true Lsat_1_v8_lg_1: 195369572-195383983 Lactuca sativa
Lsat_1_v5_gn_1_121600 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 195369572-195379571 Lactuca sativa
Lsat_1_v5_gn_1_121600 10.0kb downstream 10.0kb downstream 14412   true Lsat_1_v8_lg_1: 195379572-195393983 Lactuca sativa
Lsat_1_v5_gn_1_121600 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 195383984-195393983 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469737 5263 Asterids View MSA
123738184 5271 Pentapetalae View MSA
122791371 5272 Eudicot View MSA
122048917 5273 Angiosperm View MSA
121311170 5274 Embryophyte View MSA
123348503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain