Gene : Lsat_1_v5_gn_1_121421 L. sativa V8
Defline:  (1 of 1) PTHR12612//PTHR12612:SF10 - NUCLEAR TRANSPORT FACTOR 2 // NUCLEAR TRANSPORT FACTOR 2-LIKE PROTEIN Genomic Order:  3824
Name:  ? Lsat_1_v5_gn_1_121421 Secondary Identifier:  ? PAC:38948681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_121421 0.5kb upstream 0.5kb upstream 2482   true Lsat_1_v8_lg_1: 204498455-204500936 Lactuca sativa
Lsat_1_v5_gn_1_121421 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 204498455-204498954 Lactuca sativa
Lsat_1_v5_gn_1_121421 0.5kb downstream 0.5kb downstream 2482   true Lsat_1_v8_lg_1: 204498955-204501436 Lactuca sativa
Lsat_1_v5_gn_1_121421 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 204500937-204501436 Lactuca sativa
Lsat_1_v5_gn_1_121421 1.0kb upstream 1.0kb upstream 2982   true Lsat_1_v8_lg_1: 204497955-204500936 Lactuca sativa
Lsat_1_v5_gn_1_121421 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 204497955-204498954 Lactuca sativa
Lsat_1_v5_gn_1_121421 1.0kb downstream 1.0kb downstream 2982   true Lsat_1_v8_lg_1: 204498955-204501936 Lactuca sativa
Lsat_1_v5_gn_1_121421 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 204500937-204501936 Lactuca sativa
Lsat_1_v5_gn_1_121421 2.0kb upstream 2.0kb upstream 3982   true Lsat_1_v8_lg_1: 204496955-204500936 Lactuca sativa
Lsat_1_v5_gn_1_121421 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 204496955-204498954 Lactuca sativa
Lsat_1_v5_gn_1_121421 2.0kb downstream 2.0kb downstream 3982   true Lsat_1_v8_lg_1: 204498955-204502936 Lactuca sativa
Lsat_1_v5_gn_1_121421 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 204500937-204502936 Lactuca sativa
Lsat_1_v5_gn_1_121421 5.0kb upstream 5.0kb upstream 6982   true Lsat_1_v8_lg_1: 204493955-204500936 Lactuca sativa
Lsat_1_v5_gn_1_121421 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 204493955-204498954 Lactuca sativa
Lsat_1_v5_gn_1_121421 5.0kb downstream 5.0kb downstream 6982   true Lsat_1_v8_lg_1: 204498955-204505936 Lactuca sativa
Lsat_1_v5_gn_1_121421 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 204500937-204505936 Lactuca sativa
Lsat_1_v5_gn_1_121421 10.0kb upstream 10.0kb upstream 11982   true Lsat_1_v8_lg_1: 204488955-204500936 Lactuca sativa
Lsat_1_v5_gn_1_121421 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 204488955-204498954 Lactuca sativa
Lsat_1_v5_gn_1_121421 10.0kb downstream 10.0kb downstream 11982   true Lsat_1_v8_lg_1: 204498955-204510936 Lactuca sativa
Lsat_1_v5_gn_1_121421 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 204500937-204510936 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478889 5263 Asterids View MSA
123742062 5271 Pentapetalae View MSA
122795251 5272 Eudicot View MSA
122051393 5273 Angiosperm View MSA
121351051 5274 Embryophyte View MSA
123427249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain