Gene : Lsat_1_v5_gn_1_124601 L. sativa V8
Defline:  (1 of 6) PF04578//PF13968 - Protein of unknown function, DUF594 (DUF594) // Domain of unknown function (DUF4220) (DUF4220) Genomic Order:  3760
Name:  ? Lsat_1_v5_gn_1_124601 Secondary Identifier:  ? PAC:38945855
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_124601 0.5kb upstream 0.5kb upstream 2929   true Lsat_1_v8_lg_1: 194938519-194941447 Lactuca sativa
Lsat_1_v5_gn_1_124601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 194940948-194941447 Lactuca sativa
Lsat_1_v5_gn_1_124601 0.5kb downstream 0.5kb downstream 2929   true Lsat_1_v8_lg_1: 194938019-194940947 Lactuca sativa
Lsat_1_v5_gn_1_124601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 194938019-194938518 Lactuca sativa
Lsat_1_v5_gn_1_124601 1.0kb upstream 1.0kb upstream 3429   true Lsat_1_v8_lg_1: 194938519-194941947 Lactuca sativa
Lsat_1_v5_gn_1_124601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 194940948-194941947 Lactuca sativa
Lsat_1_v5_gn_1_124601 1.0kb downstream 1.0kb downstream 3429   true Lsat_1_v8_lg_1: 194937519-194940947 Lactuca sativa
Lsat_1_v5_gn_1_124601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 194937519-194938518 Lactuca sativa
Lsat_1_v5_gn_1_124601 2.0kb upstream 2.0kb upstream 4429   true Lsat_1_v8_lg_1: 194938519-194942947 Lactuca sativa
Lsat_1_v5_gn_1_124601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 194940948-194942947 Lactuca sativa
Lsat_1_v5_gn_1_124601 2.0kb downstream 2.0kb downstream 4429   true Lsat_1_v8_lg_1: 194936519-194940947 Lactuca sativa
Lsat_1_v5_gn_1_124601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 194936519-194938518 Lactuca sativa
Lsat_1_v5_gn_1_124601 5.0kb upstream 5.0kb upstream 7429   true Lsat_1_v8_lg_1: 194938519-194945947 Lactuca sativa
Lsat_1_v5_gn_1_124601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 194940948-194945947 Lactuca sativa
Lsat_1_v5_gn_1_124601 5.0kb downstream 5.0kb downstream 7429   true Lsat_1_v8_lg_1: 194933519-194940947 Lactuca sativa
Lsat_1_v5_gn_1_124601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 194933519-194938518 Lactuca sativa
Lsat_1_v5_gn_1_124601 10.0kb upstream 10.0kb upstream 12429   true Lsat_1_v8_lg_1: 194938519-194950947 Lactuca sativa
Lsat_1_v5_gn_1_124601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 194940948-194950947 Lactuca sativa
Lsat_1_v5_gn_1_124601 10.0kb downstream 10.0kb downstream 12429   true Lsat_1_v8_lg_1: 194928519-194940947 Lactuca sativa
Lsat_1_v5_gn_1_124601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 194928519-194938518 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
121481406 5263 Asterids View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain