Gene : Lsat_1_v5_gn_1_126300 L. sativa V8
Defline:  (1 of 1) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT Genomic Order:  3836
Name:  ? Lsat_1_v5_gn_1_126300 Secondary Identifier:  ? PAC:38945784
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_126300 0.5kb upstream 0.5kb upstream 6296   true Lsat_1_v8_lg_1: 205423097-205429392 Lactuca sativa
Lsat_1_v5_gn_1_126300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 205428893-205429392 Lactuca sativa
Lsat_1_v5_gn_1_126300 0.5kb downstream 0.5kb downstream 6296   true Lsat_1_v8_lg_1: 205422597-205428892 Lactuca sativa
Lsat_1_v5_gn_1_126300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 205422597-205423096 Lactuca sativa
Lsat_1_v5_gn_1_126300 1.0kb upstream 1.0kb upstream 6796   true Lsat_1_v8_lg_1: 205423097-205429892 Lactuca sativa
Lsat_1_v5_gn_1_126300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 205428893-205429892 Lactuca sativa
Lsat_1_v5_gn_1_126300 1.0kb downstream 1.0kb downstream 6796   true Lsat_1_v8_lg_1: 205422097-205428892 Lactuca sativa
Lsat_1_v5_gn_1_126300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 205422097-205423096 Lactuca sativa
Lsat_1_v5_gn_1_126300 2.0kb upstream 2.0kb upstream 7796   true Lsat_1_v8_lg_1: 205423097-205430892 Lactuca sativa
Lsat_1_v5_gn_1_126300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 205428893-205430892 Lactuca sativa
Lsat_1_v5_gn_1_126300 2.0kb downstream 2.0kb downstream 7796   true Lsat_1_v8_lg_1: 205421097-205428892 Lactuca sativa
Lsat_1_v5_gn_1_126300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 205421097-205423096 Lactuca sativa
Lsat_1_v5_gn_1_126300 5.0kb upstream 5.0kb upstream 10796   true Lsat_1_v8_lg_1: 205423097-205433892 Lactuca sativa
Lsat_1_v5_gn_1_126300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 205428893-205433892 Lactuca sativa
Lsat_1_v5_gn_1_126300 5.0kb downstream 5.0kb downstream 10796   true Lsat_1_v8_lg_1: 205418097-205428892 Lactuca sativa
Lsat_1_v5_gn_1_126300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 205418097-205423096 Lactuca sativa
Lsat_1_v5_gn_1_126300 10.0kb upstream 10.0kb upstream 15796   true Lsat_1_v8_lg_1: 205423097-205438892 Lactuca sativa
Lsat_1_v5_gn_1_126300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 205428893-205438892 Lactuca sativa
Lsat_1_v5_gn_1_126300 10.0kb downstream 10.0kb downstream 15796   true Lsat_1_v8_lg_1: 205413097-205428892 Lactuca sativa
Lsat_1_v5_gn_1_126300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 205413097-205423096 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474330 5263 Asterids View MSA
123746124 5271 Pentapetalae View MSA
122796668 5272 Eudicot View MSA
122049145 5273 Angiosperm View MSA
121351360 5274 Embryophyte View MSA
123427604 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain