Gene : Lsat_1_v5_gn_1_127501 L. sativa V8
Defline:  (1 of 1) PTHR31062:SF1 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED Genomic Order:  3804
Name:  ? Lsat_1_v5_gn_1_127501 Secondary Identifier:  ? PAC:38943598
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_127501 0.5kb upstream 0.5kb upstream 3337   true Lsat_1_v8_lg_1: 201307499-201310835 Lactuca sativa
Lsat_1_v5_gn_1_127501 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 201307499-201307998 Lactuca sativa
Lsat_1_v5_gn_1_127501 0.5kb downstream 0.5kb downstream 3337   true Lsat_1_v8_lg_1: 201307999-201311335 Lactuca sativa
Lsat_1_v5_gn_1_127501 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 201310836-201311335 Lactuca sativa
Lsat_1_v5_gn_1_127501 1.0kb upstream 1.0kb upstream 3837   true Lsat_1_v8_lg_1: 201306999-201310835 Lactuca sativa
Lsat_1_v5_gn_1_127501 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 201306999-201307998 Lactuca sativa
Lsat_1_v5_gn_1_127501 1.0kb downstream 1.0kb downstream 3837   true Lsat_1_v8_lg_1: 201307999-201311835 Lactuca sativa
Lsat_1_v5_gn_1_127501 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 201310836-201311835 Lactuca sativa
Lsat_1_v5_gn_1_127501 2.0kb upstream 2.0kb upstream 4837   true Lsat_1_v8_lg_1: 201305999-201310835 Lactuca sativa
Lsat_1_v5_gn_1_127501 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 201305999-201307998 Lactuca sativa
Lsat_1_v5_gn_1_127501 2.0kb downstream 2.0kb downstream 4837   true Lsat_1_v8_lg_1: 201307999-201312835 Lactuca sativa
Lsat_1_v5_gn_1_127501 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 201310836-201312835 Lactuca sativa
Lsat_1_v5_gn_1_127501 5.0kb upstream 5.0kb upstream 7837   true Lsat_1_v8_lg_1: 201302999-201310835 Lactuca sativa
Lsat_1_v5_gn_1_127501 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 201302999-201307998 Lactuca sativa
Lsat_1_v5_gn_1_127501 5.0kb downstream 5.0kb downstream 7837   true Lsat_1_v8_lg_1: 201307999-201315835 Lactuca sativa
Lsat_1_v5_gn_1_127501 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 201310836-201315835 Lactuca sativa
Lsat_1_v5_gn_1_127501 10.0kb upstream 10.0kb upstream 12837   true Lsat_1_v8_lg_1: 201297999-201310835 Lactuca sativa
Lsat_1_v5_gn_1_127501 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 201297999-201307998 Lactuca sativa
Lsat_1_v5_gn_1_127501 10.0kb downstream 10.0kb downstream 12837   true Lsat_1_v8_lg_1: 201307999-201320835 Lactuca sativa
Lsat_1_v5_gn_1_127501 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 201310836-201320835 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474339 5263 Asterids View MSA
123740499 5271 Pentapetalae View MSA
122785607 5272 Eudicot View MSA
122047013 5273 Angiosperm View MSA
121352157 5274 Embryophyte View MSA
123382575 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain