Gene : Lsat_1_v5_gn_1_106281 L. sativa V8
Defline:  (1 of 2) KOG4443 - Putative transcription factor HALR/MLL3, involved in embryonic development Genomic Order:  3346
Name:  ? Lsat_1_v5_gn_1_106281 Secondary Identifier:  ? PAC:38944149
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_106281 0.5kb upstream 0.5kb upstream 6848   true Lsat_1_v8_lg_1: 150409943-150416790 Lactuca sativa
Lsat_1_v5_gn_1_106281 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 150409943-150410442 Lactuca sativa
Lsat_1_v5_gn_1_106281 0.5kb downstream 0.5kb downstream 6848   true Lsat_1_v8_lg_1: 150410443-150417290 Lactuca sativa
Lsat_1_v5_gn_1_106281 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 150416791-150417290 Lactuca sativa
Lsat_1_v5_gn_1_106281 1.0kb upstream 1.0kb upstream 7348   true Lsat_1_v8_lg_1: 150409443-150416790 Lactuca sativa
Lsat_1_v5_gn_1_106281 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 150409443-150410442 Lactuca sativa
Lsat_1_v5_gn_1_106281 1.0kb downstream 1.0kb downstream 7348   true Lsat_1_v8_lg_1: 150410443-150417790 Lactuca sativa
Lsat_1_v5_gn_1_106281 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 150416791-150417790 Lactuca sativa
Lsat_1_v5_gn_1_106281 2.0kb upstream 2.0kb upstream 8348   true Lsat_1_v8_lg_1: 150408443-150416790 Lactuca sativa
Lsat_1_v5_gn_1_106281 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 150408443-150410442 Lactuca sativa
Lsat_1_v5_gn_1_106281 2.0kb downstream 2.0kb downstream 8348   true Lsat_1_v8_lg_1: 150410443-150418790 Lactuca sativa
Lsat_1_v5_gn_1_106281 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 150416791-150418790 Lactuca sativa
Lsat_1_v5_gn_1_106281 5.0kb upstream 5.0kb upstream 11348   true Lsat_1_v8_lg_1: 150405443-150416790 Lactuca sativa
Lsat_1_v5_gn_1_106281 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 150405443-150410442 Lactuca sativa
Lsat_1_v5_gn_1_106281 5.0kb downstream 5.0kb downstream 11348   true Lsat_1_v8_lg_1: 150410443-150421790 Lactuca sativa
Lsat_1_v5_gn_1_106281 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 150416791-150421790 Lactuca sativa
Lsat_1_v5_gn_1_106281 10.0kb upstream 10.0kb upstream 16348   true Lsat_1_v8_lg_1: 150400443-150416790 Lactuca sativa
Lsat_1_v5_gn_1_106281 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 150400443-150410442 Lactuca sativa
Lsat_1_v5_gn_1_106281 10.0kb downstream 10.0kb downstream 16348   true Lsat_1_v8_lg_1: 150410443-150426790 Lactuca sativa
Lsat_1_v5_gn_1_106281 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 150416791-150426790 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477487 5263 Asterids View MSA
123748357 5271 Pentapetalae View MSA
122789361 5272 Eudicot View MSA
122043559 5273 Angiosperm View MSA
121347364 5274 Embryophyte View MSA
123380534 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain