Gene : Lsat_1_v5_gn_1_2021 L. sativa V8
Defline:  (1 of 4) K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) Genomic Order:  39
Name:  ? Lsat_1_v5_gn_1_2021 Secondary Identifier:  ? PAC:38948756
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_2021 0.5kb upstream 0.5kb upstream 6681   true Lsat_1_v8_lg_1: 1918542-1925222 Lactuca sativa
Lsat_1_v5_gn_1_2021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 1918542-1919041 Lactuca sativa
Lsat_1_v5_gn_1_2021 0.5kb downstream 0.5kb downstream 6681   true Lsat_1_v8_lg_1: 1919042-1925722 Lactuca sativa
Lsat_1_v5_gn_1_2021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 1925223-1925722 Lactuca sativa
Lsat_1_v5_gn_1_2021 1.0kb upstream 1.0kb upstream 7181   true Lsat_1_v8_lg_1: 1918042-1925222 Lactuca sativa
Lsat_1_v5_gn_1_2021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 1918042-1919041 Lactuca sativa
Lsat_1_v5_gn_1_2021 1.0kb downstream 1.0kb downstream 7181   true Lsat_1_v8_lg_1: 1919042-1926222 Lactuca sativa
Lsat_1_v5_gn_1_2021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 1925223-1926222 Lactuca sativa
Lsat_1_v5_gn_1_2021 2.0kb upstream 2.0kb upstream 8181   true Lsat_1_v8_lg_1: 1917042-1925222 Lactuca sativa
Lsat_1_v5_gn_1_2021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 1917042-1919041 Lactuca sativa
Lsat_1_v5_gn_1_2021 2.0kb downstream 2.0kb downstream 8181   true Lsat_1_v8_lg_1: 1919042-1927222 Lactuca sativa
Lsat_1_v5_gn_1_2021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 1925223-1927222 Lactuca sativa
Lsat_1_v5_gn_1_2021 5.0kb upstream 5.0kb upstream 11181   true Lsat_1_v8_lg_1: 1914042-1925222 Lactuca sativa
Lsat_1_v5_gn_1_2021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 1914042-1919041 Lactuca sativa
Lsat_1_v5_gn_1_2021 5.0kb downstream 5.0kb downstream 11181   true Lsat_1_v8_lg_1: 1919042-1930222 Lactuca sativa
Lsat_1_v5_gn_1_2021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 1925223-1930222 Lactuca sativa
Lsat_1_v5_gn_1_2021 10.0kb upstream 10.0kb upstream 16181   true Lsat_1_v8_lg_1: 1909042-1925222 Lactuca sativa
Lsat_1_v5_gn_1_2021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 1909042-1919041 Lactuca sativa
Lsat_1_v5_gn_1_2021 10.0kb downstream 10.0kb downstream 16181   true Lsat_1_v8_lg_1: 1919042-1935222 Lactuca sativa
Lsat_1_v5_gn_1_2021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 1925223-1935222 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121761851 5273 Angiosperm View MSA
121452057 5263 Asterids View MSA
123718807 5271 Pentapetalae View MSA
122752460 5272 Eudicot View MSA
121033548 5274 Embryophyte View MSA
123073677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain