Gene : Lsat_1_v5_gn_1_24001 L. sativa V8
Defline:  (1 of 2) PTHR11058//PTHR11058:SF11 - NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3 // NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3 Genomic Order:  760
Name:  ? Lsat_1_v5_gn_1_24001 Secondary Identifier:  ? PAC:38946370
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3781 Lactuca sativa pathologic  
Lsativa PWY-4302 Lactuca sativa pathologic  
Lsativa PWY-5083 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_24001 0.5kb upstream 0.5kb upstream 1296   true Lsat_1_v8_lg_1: 26974844-26976139 Lactuca sativa
Lsat_1_v5_gn_1_24001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 26974844-26975343 Lactuca sativa
Lsat_1_v5_gn_1_24001 0.5kb downstream 0.5kb downstream 1296   true Lsat_1_v8_lg_1: 26975344-26976639 Lactuca sativa
Lsat_1_v5_gn_1_24001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 26976140-26976639 Lactuca sativa
Lsat_1_v5_gn_1_24001 1.0kb upstream 1.0kb upstream 1796   true Lsat_1_v8_lg_1: 26974344-26976139 Lactuca sativa
Lsat_1_v5_gn_1_24001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 26974344-26975343 Lactuca sativa
Lsat_1_v5_gn_1_24001 1.0kb downstream 1.0kb downstream 1796   true Lsat_1_v8_lg_1: 26975344-26977139 Lactuca sativa
Lsat_1_v5_gn_1_24001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 26976140-26977139 Lactuca sativa
Lsat_1_v5_gn_1_24001 2.0kb upstream 2.0kb upstream 2796   true Lsat_1_v8_lg_1: 26973344-26976139 Lactuca sativa
Lsat_1_v5_gn_1_24001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 26973344-26975343 Lactuca sativa
Lsat_1_v5_gn_1_24001 2.0kb downstream 2.0kb downstream 2796   true Lsat_1_v8_lg_1: 26975344-26978139 Lactuca sativa
Lsat_1_v5_gn_1_24001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 26976140-26978139 Lactuca sativa
Lsat_1_v5_gn_1_24001 5.0kb upstream 5.0kb upstream 5796   true Lsat_1_v8_lg_1: 26970344-26976139 Lactuca sativa
Lsat_1_v5_gn_1_24001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 26970344-26975343 Lactuca sativa
Lsat_1_v5_gn_1_24001 5.0kb downstream 5.0kb downstream 5796   true Lsat_1_v8_lg_1: 26975344-26981139 Lactuca sativa
Lsat_1_v5_gn_1_24001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 26976140-26981139 Lactuca sativa
Lsat_1_v5_gn_1_24001 10.0kb upstream 10.0kb upstream 10796   true Lsat_1_v8_lg_1: 26965344-26976139 Lactuca sativa
Lsat_1_v5_gn_1_24001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 26965344-26975343 Lactuca sativa
Lsat_1_v5_gn_1_24001 10.0kb downstream 10.0kb downstream 10796   true Lsat_1_v8_lg_1: 26975344-26986139 Lactuca sativa
Lsat_1_v5_gn_1_24001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 26976140-26986139 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780013 5273 Angiosperm View MSA
121450909 5263 Asterids View MSA
123744700 5271 Pentapetalae View MSA
122771225 5272 Eudicot View MSA
121051648 5274 Embryophyte View MSA
123091731 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain