Gene : Lsat_1_v5_gn_1_33521 L. sativa V8
Defline:  (1 of 2) K14546 - U3 small nucleolar RNA-associated protein 5 (UTP5, WDR43) Genomic Order:  1145
Name:  ? Lsat_1_v5_gn_1_33521 Secondary Identifier:  ? PAC:38942242
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_33521 0.5kb upstream 0.5kb upstream 4335   true Lsat_1_v8_lg_1: 39069386-39073720 Lactuca sativa
Lsat_1_v5_gn_1_33521 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 39073221-39073720 Lactuca sativa
Lsat_1_v5_gn_1_33521 0.5kb downstream 0.5kb downstream 4335   true Lsat_1_v8_lg_1: 39068886-39073220 Lactuca sativa
Lsat_1_v5_gn_1_33521 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 39068886-39069385 Lactuca sativa
Lsat_1_v5_gn_1_33521 1.0kb upstream 1.0kb upstream 4835   true Lsat_1_v8_lg_1: 39069386-39074220 Lactuca sativa
Lsat_1_v5_gn_1_33521 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 39073221-39074220 Lactuca sativa
Lsat_1_v5_gn_1_33521 1.0kb downstream 1.0kb downstream 4835   true Lsat_1_v8_lg_1: 39068386-39073220 Lactuca sativa
Lsat_1_v5_gn_1_33521 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 39068386-39069385 Lactuca sativa
Lsat_1_v5_gn_1_33521 2.0kb upstream 2.0kb upstream 5835   true Lsat_1_v8_lg_1: 39069386-39075220 Lactuca sativa
Lsat_1_v5_gn_1_33521 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 39073221-39075220 Lactuca sativa
Lsat_1_v5_gn_1_33521 2.0kb downstream 2.0kb downstream 5835   true Lsat_1_v8_lg_1: 39067386-39073220 Lactuca sativa
Lsat_1_v5_gn_1_33521 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 39067386-39069385 Lactuca sativa
Lsat_1_v5_gn_1_33521 5.0kb upstream 5.0kb upstream 8835   true Lsat_1_v8_lg_1: 39069386-39078220 Lactuca sativa
Lsat_1_v5_gn_1_33521 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 39073221-39078220 Lactuca sativa
Lsat_1_v5_gn_1_33521 5.0kb downstream 5.0kb downstream 8835   true Lsat_1_v8_lg_1: 39064386-39073220 Lactuca sativa
Lsat_1_v5_gn_1_33521 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 39064386-39069385 Lactuca sativa
Lsat_1_v5_gn_1_33521 10.0kb upstream 10.0kb upstream 13835   true Lsat_1_v8_lg_1: 39069386-39083220 Lactuca sativa
Lsat_1_v5_gn_1_33521 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 39073221-39083220 Lactuca sativa
Lsat_1_v5_gn_1_33521 10.0kb downstream 10.0kb downstream 13835   true Lsat_1_v8_lg_1: 39059386-39073220 Lactuca sativa
Lsat_1_v5_gn_1_33521 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 39059386-39069385 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477919 5263 Asterids View MSA
123742846 5271 Pentapetalae View MSA
122770409 5272 Eudicot View MSA
122048492 5273 Angiosperm View MSA
121346834 5274 Embryophyte View MSA
123423807 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain