Gene : Lsat_1_v5_gn_1_34861 L. sativa V8
Defline:  (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) Genomic Order:  1171
Name:  ? Lsat_1_v5_gn_1_34861 Secondary Identifier:  ? PAC:38943235
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_34861 0.5kb upstream 0.5kb upstream 8587   true Lsat_1_v8_lg_1: 39729288-39737874 Lactuca sativa
Lsat_1_v5_gn_1_34861 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 39737375-39737874 Lactuca sativa
Lsat_1_v5_gn_1_34861 0.5kb downstream 0.5kb downstream 8587   true Lsat_1_v8_lg_1: 39728788-39737374 Lactuca sativa
Lsat_1_v5_gn_1_34861 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 39728788-39729287 Lactuca sativa
Lsat_1_v5_gn_1_34861 1.0kb upstream 1.0kb upstream 9087   true Lsat_1_v8_lg_1: 39729288-39738374 Lactuca sativa
Lsat_1_v5_gn_1_34861 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 39737375-39738374 Lactuca sativa
Lsat_1_v5_gn_1_34861 1.0kb downstream 1.0kb downstream 9087   true Lsat_1_v8_lg_1: 39728288-39737374 Lactuca sativa
Lsat_1_v5_gn_1_34861 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 39728288-39729287 Lactuca sativa
Lsat_1_v5_gn_1_34861 2.0kb upstream 2.0kb upstream 10087   true Lsat_1_v8_lg_1: 39729288-39739374 Lactuca sativa
Lsat_1_v5_gn_1_34861 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 39737375-39739374 Lactuca sativa
Lsat_1_v5_gn_1_34861 2.0kb downstream 2.0kb downstream 10087   true Lsat_1_v8_lg_1: 39727288-39737374 Lactuca sativa
Lsat_1_v5_gn_1_34861 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 39727288-39729287 Lactuca sativa
Lsat_1_v5_gn_1_34861 5.0kb upstream 5.0kb upstream 13087   true Lsat_1_v8_lg_1: 39729288-39742374 Lactuca sativa
Lsat_1_v5_gn_1_34861 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 39737375-39742374 Lactuca sativa
Lsat_1_v5_gn_1_34861 5.0kb downstream 5.0kb downstream 13087   true Lsat_1_v8_lg_1: 39724288-39737374 Lactuca sativa
Lsat_1_v5_gn_1_34861 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 39724288-39729287 Lactuca sativa
Lsat_1_v5_gn_1_34861 10.0kb upstream 10.0kb upstream 18087   true Lsat_1_v8_lg_1: 39729288-39747374 Lactuca sativa
Lsat_1_v5_gn_1_34861 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 39737375-39747374 Lactuca sativa
Lsat_1_v5_gn_1_34861 10.0kb downstream 10.0kb downstream 18087   true Lsat_1_v8_lg_1: 39719288-39737374 Lactuca sativa
Lsat_1_v5_gn_1_34861 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 39719288-39729287 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478959 5263 Asterids View MSA
123745194 5271 Pentapetalae View MSA
122792729 5272 Eudicot View MSA
122046089 5273 Angiosperm View MSA
121350905 5274 Embryophyte View MSA
123424044 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain