Gene : Lsat_1_v5_gn_1_36620 L. sativa V8
Defline:  (1 of 2) PTHR12565:SF174 - TRANSCRIPTION FACTOR BHLH87 Genomic Order:  1224
Name:  ? Lsat_1_v5_gn_1_36620 Secondary Identifier:  ? PAC:38946538
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_36620 0.5kb upstream 0.5kb upstream 2008   true Lsat_1_v8_lg_1: 41174204-41176211 Lactuca sativa
Lsat_1_v5_gn_1_36620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 41174204-41174703 Lactuca sativa
Lsat_1_v5_gn_1_36620 0.5kb downstream 0.5kb downstream 2008   true Lsat_1_v8_lg_1: 41174704-41176711 Lactuca sativa
Lsat_1_v5_gn_1_36620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 41176212-41176711 Lactuca sativa
Lsat_1_v5_gn_1_36620 1.0kb upstream 1.0kb upstream 2508   true Lsat_1_v8_lg_1: 41173704-41176211 Lactuca sativa
Lsat_1_v5_gn_1_36620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 41173704-41174703 Lactuca sativa
Lsat_1_v5_gn_1_36620 1.0kb downstream 1.0kb downstream 2508   true Lsat_1_v8_lg_1: 41174704-41177211 Lactuca sativa
Lsat_1_v5_gn_1_36620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 41176212-41177211 Lactuca sativa
Lsat_1_v5_gn_1_36620 2.0kb upstream 2.0kb upstream 3508   true Lsat_1_v8_lg_1: 41172704-41176211 Lactuca sativa
Lsat_1_v5_gn_1_36620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 41172704-41174703 Lactuca sativa
Lsat_1_v5_gn_1_36620 2.0kb downstream 2.0kb downstream 3508   true Lsat_1_v8_lg_1: 41174704-41178211 Lactuca sativa
Lsat_1_v5_gn_1_36620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 41176212-41178211 Lactuca sativa
Lsat_1_v5_gn_1_36620 5.0kb upstream 5.0kb upstream 6508   true Lsat_1_v8_lg_1: 41169704-41176211 Lactuca sativa
Lsat_1_v5_gn_1_36620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 41169704-41174703 Lactuca sativa
Lsat_1_v5_gn_1_36620 5.0kb downstream 5.0kb downstream 6508   true Lsat_1_v8_lg_1: 41174704-41181211 Lactuca sativa
Lsat_1_v5_gn_1_36620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 41176212-41181211 Lactuca sativa
Lsat_1_v5_gn_1_36620 10.0kb upstream 10.0kb upstream 11508   true Lsat_1_v8_lg_1: 41164704-41176211 Lactuca sativa
Lsat_1_v5_gn_1_36620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 41164704-41174703 Lactuca sativa
Lsat_1_v5_gn_1_36620 10.0kb downstream 10.0kb downstream 11508   true Lsat_1_v8_lg_1: 41174704-41186211 Lactuca sativa
Lsat_1_v5_gn_1_36620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 41176212-41186211 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041087 5273 Angiosperm View MSA
121474953 5263 Asterids View MSA
123741296 5271 Pentapetalae View MSA
122791069 5272 Eudicot View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain