Gene : Lsat_1_v5_gn_1_3881 L. sativa V8
Defline:  (1 of 2) K12118 - cryptochrome 1 (CRY1) Genomic Order:  120
Name:  ? Lsat_1_v5_gn_1_3881 Secondary Identifier:  ? PAC:38944347
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_3881 0.5kb upstream 0.5kb upstream 4480   true Lsat_1_v8_lg_1: 4371788-4376267 Lactuca sativa
Lsat_1_v5_gn_1_3881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 4375768-4376267 Lactuca sativa
Lsat_1_v5_gn_1_3881 0.5kb downstream 0.5kb downstream 4480   true Lsat_1_v8_lg_1: 4371288-4375767 Lactuca sativa
Lsat_1_v5_gn_1_3881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 4371288-4371787 Lactuca sativa
Lsat_1_v5_gn_1_3881 1.0kb upstream 1.0kb upstream 4980   true Lsat_1_v8_lg_1: 4371788-4376767 Lactuca sativa
Lsat_1_v5_gn_1_3881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 4375768-4376767 Lactuca sativa
Lsat_1_v5_gn_1_3881 1.0kb downstream 1.0kb downstream 4980   true Lsat_1_v8_lg_1: 4370788-4375767 Lactuca sativa
Lsat_1_v5_gn_1_3881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 4370788-4371787 Lactuca sativa
Lsat_1_v5_gn_1_3881 2.0kb upstream 2.0kb upstream 5980   true Lsat_1_v8_lg_1: 4371788-4377767 Lactuca sativa
Lsat_1_v5_gn_1_3881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 4375768-4377767 Lactuca sativa
Lsat_1_v5_gn_1_3881 2.0kb downstream 2.0kb downstream 5980   true Lsat_1_v8_lg_1: 4369788-4375767 Lactuca sativa
Lsat_1_v5_gn_1_3881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 4369788-4371787 Lactuca sativa
Lsat_1_v5_gn_1_3881 5.0kb upstream 5.0kb upstream 8980   true Lsat_1_v8_lg_1: 4371788-4380767 Lactuca sativa
Lsat_1_v5_gn_1_3881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 4375768-4380767 Lactuca sativa
Lsat_1_v5_gn_1_3881 5.0kb downstream 5.0kb downstream 8980   true Lsat_1_v8_lg_1: 4366788-4375767 Lactuca sativa
Lsat_1_v5_gn_1_3881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 4366788-4371787 Lactuca sativa
Lsat_1_v5_gn_1_3881 10.0kb upstream 10.0kb upstream 13980   true Lsat_1_v8_lg_1: 4371788-4385767 Lactuca sativa
Lsat_1_v5_gn_1_3881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 4375768-4385767 Lactuca sativa
Lsat_1_v5_gn_1_3881 10.0kb downstream 10.0kb downstream 13980   true Lsat_1_v8_lg_1: 4361788-4375767 Lactuca sativa
Lsat_1_v5_gn_1_3881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 4361788-4371787 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467356 5263 Asterids View MSA
123736970 5271 Pentapetalae View MSA
122788964 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain