Gene : Lsat_1_v5_gn_1_39601 L. sativa V8
Defline:  (1 of 2) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  1341
Name:  ? Lsat_1_v5_gn_1_39601 Secondary Identifier:  ? PAC:38943857
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa SER-GLYSYN-PWY Lactuca sativa pathologic  
Lsativa SERSYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_39601 0.5kb upstream 0.5kb upstream 3519   true Lsat_1_v8_lg_1: 45234754-45238272 Lactuca sativa
Lsat_1_v5_gn_1_39601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 45234754-45235253 Lactuca sativa
Lsat_1_v5_gn_1_39601 0.5kb downstream 0.5kb downstream 3519   true Lsat_1_v8_lg_1: 45235254-45238772 Lactuca sativa
Lsat_1_v5_gn_1_39601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 45238273-45238772 Lactuca sativa
Lsat_1_v5_gn_1_39601 1.0kb upstream 1.0kb upstream 4019   true Lsat_1_v8_lg_1: 45234254-45238272 Lactuca sativa
Lsat_1_v5_gn_1_39601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 45234254-45235253 Lactuca sativa
Lsat_1_v5_gn_1_39601 1.0kb downstream 1.0kb downstream 4019   true Lsat_1_v8_lg_1: 45235254-45239272 Lactuca sativa
Lsat_1_v5_gn_1_39601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 45238273-45239272 Lactuca sativa
Lsat_1_v5_gn_1_39601 2.0kb upstream 2.0kb upstream 5019   true Lsat_1_v8_lg_1: 45233254-45238272 Lactuca sativa
Lsat_1_v5_gn_1_39601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 45233254-45235253 Lactuca sativa
Lsat_1_v5_gn_1_39601 2.0kb downstream 2.0kb downstream 5019   true Lsat_1_v8_lg_1: 45235254-45240272 Lactuca sativa
Lsat_1_v5_gn_1_39601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 45238273-45240272 Lactuca sativa
Lsat_1_v5_gn_1_39601 5.0kb upstream 5.0kb upstream 8019   true Lsat_1_v8_lg_1: 45230254-45238272 Lactuca sativa
Lsat_1_v5_gn_1_39601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 45230254-45235253 Lactuca sativa
Lsat_1_v5_gn_1_39601 5.0kb downstream 5.0kb downstream 8019   true Lsat_1_v8_lg_1: 45235254-45243272 Lactuca sativa
Lsat_1_v5_gn_1_39601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 45238273-45243272 Lactuca sativa
Lsat_1_v5_gn_1_39601 10.0kb upstream 10.0kb upstream 13019   true Lsat_1_v8_lg_1: 45225254-45238272 Lactuca sativa
Lsat_1_v5_gn_1_39601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 45225254-45235253 Lactuca sativa
Lsat_1_v5_gn_1_39601 10.0kb downstream 10.0kb downstream 13019   true Lsat_1_v8_lg_1: 45235254-45248272 Lactuca sativa
Lsat_1_v5_gn_1_39601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 45238273-45248272 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468047 5263 Asterids View MSA
123744106 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain