Gene : Lsat_1_v5_gn_1_30260 L. sativa V8
Defline:  (1 of 1) PTHR10857//PTHR10857:SF12//PTHR10857:SF26 - COPINE // SUBFAMILY NOT NAMED // PROTEIN BONZAI 3 Genomic Order:  1046
Name:  ? Lsat_1_v5_gn_1_30260 Secondary Identifier:  ? PAC:38942789
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_30260 0.5kb upstream 0.5kb upstream 11492   true Lsat_1_v8_lg_1: 35327831-35339322 Lactuca sativa
Lsat_1_v5_gn_1_30260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 35327831-35328330 Lactuca sativa
Lsat_1_v5_gn_1_30260 0.5kb downstream 0.5kb downstream 11492   true Lsat_1_v8_lg_1: 35328331-35339822 Lactuca sativa
Lsat_1_v5_gn_1_30260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 35339323-35339822 Lactuca sativa
Lsat_1_v5_gn_1_30260 1.0kb upstream 1.0kb upstream 11992   true Lsat_1_v8_lg_1: 35327331-35339322 Lactuca sativa
Lsat_1_v5_gn_1_30260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 35327331-35328330 Lactuca sativa
Lsat_1_v5_gn_1_30260 1.0kb downstream 1.0kb downstream 11992   true Lsat_1_v8_lg_1: 35328331-35340322 Lactuca sativa
Lsat_1_v5_gn_1_30260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 35339323-35340322 Lactuca sativa
Lsat_1_v5_gn_1_30260 2.0kb upstream 2.0kb upstream 12992   true Lsat_1_v8_lg_1: 35326331-35339322 Lactuca sativa
Lsat_1_v5_gn_1_30260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 35326331-35328330 Lactuca sativa
Lsat_1_v5_gn_1_30260 2.0kb downstream 2.0kb downstream 12992   true Lsat_1_v8_lg_1: 35328331-35341322 Lactuca sativa
Lsat_1_v5_gn_1_30260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 35339323-35341322 Lactuca sativa
Lsat_1_v5_gn_1_30260 5.0kb upstream 5.0kb upstream 15992   true Lsat_1_v8_lg_1: 35323331-35339322 Lactuca sativa
Lsat_1_v5_gn_1_30260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 35323331-35328330 Lactuca sativa
Lsat_1_v5_gn_1_30260 5.0kb downstream 5.0kb downstream 15992   true Lsat_1_v8_lg_1: 35328331-35344322 Lactuca sativa
Lsat_1_v5_gn_1_30260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 35339323-35344322 Lactuca sativa
Lsat_1_v5_gn_1_30260 10.0kb upstream 10.0kb upstream 20992   true Lsat_1_v8_lg_1: 35318331-35339322 Lactuca sativa
Lsat_1_v5_gn_1_30260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 35318331-35328330 Lactuca sativa
Lsat_1_v5_gn_1_30260 10.0kb downstream 10.0kb downstream 20992   true Lsat_1_v8_lg_1: 35328331-35349322 Lactuca sativa
Lsat_1_v5_gn_1_30260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 35339323-35349322 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471652 5263 Asterids View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain