Gene : Lsat_1_v5_gn_1_49141 L. sativa V8
Defline:  (1 of 17) 3.4.19.12//3.4.22.69 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase // SARS coronavirus main proteinase / Severe acute respiratory syndrome coronavirus main protease Genomic Order:  1610
Name:  ? Lsat_1_v5_gn_1_49141 Secondary Identifier:  ? PAC:38947300
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_49141 0.5kb upstream 0.5kb upstream 4556   true Lsat_1_v8_lg_1: 54875020-54879575 Lactuca sativa
Lsat_1_v5_gn_1_49141 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 54875020-54875519 Lactuca sativa
Lsat_1_v5_gn_1_49141 0.5kb downstream 0.5kb downstream 4556   true Lsat_1_v8_lg_1: 54875520-54880075 Lactuca sativa
Lsat_1_v5_gn_1_49141 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 54879576-54880075 Lactuca sativa
Lsat_1_v5_gn_1_49141 1.0kb upstream 1.0kb upstream 5056   true Lsat_1_v8_lg_1: 54874520-54879575 Lactuca sativa
Lsat_1_v5_gn_1_49141 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 54874520-54875519 Lactuca sativa
Lsat_1_v5_gn_1_49141 1.0kb downstream 1.0kb downstream 5056   true Lsat_1_v8_lg_1: 54875520-54880575 Lactuca sativa
Lsat_1_v5_gn_1_49141 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 54879576-54880575 Lactuca sativa
Lsat_1_v5_gn_1_49141 2.0kb upstream 2.0kb upstream 6056   true Lsat_1_v8_lg_1: 54873520-54879575 Lactuca sativa
Lsat_1_v5_gn_1_49141 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 54873520-54875519 Lactuca sativa
Lsat_1_v5_gn_1_49141 2.0kb downstream 2.0kb downstream 6056   true Lsat_1_v8_lg_1: 54875520-54881575 Lactuca sativa
Lsat_1_v5_gn_1_49141 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 54879576-54881575 Lactuca sativa
Lsat_1_v5_gn_1_49141 5.0kb upstream 5.0kb upstream 9056   true Lsat_1_v8_lg_1: 54870520-54879575 Lactuca sativa
Lsat_1_v5_gn_1_49141 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 54870520-54875519 Lactuca sativa
Lsat_1_v5_gn_1_49141 5.0kb downstream 5.0kb downstream 9056   true Lsat_1_v8_lg_1: 54875520-54884575 Lactuca sativa
Lsat_1_v5_gn_1_49141 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 54879576-54884575 Lactuca sativa
Lsat_1_v5_gn_1_49141 10.0kb upstream 10.0kb upstream 14056   true Lsat_1_v8_lg_1: 54865520-54879575 Lactuca sativa
Lsat_1_v5_gn_1_49141 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 54865520-54875519 Lactuca sativa
Lsat_1_v5_gn_1_49141 10.0kb downstream 10.0kb downstream 14056   true Lsat_1_v8_lg_1: 54875520-54889575 Lactuca sativa
Lsat_1_v5_gn_1_49141 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 54879576-54889575 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474882 5263 Asterids View MSA
123740784 5271 Pentapetalae View MSA
122794122 5272 Eudicot View MSA
122050124 5273 Angiosperm View MSA
121311754 5274 Embryophyte View MSA
123349009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain