Gene : Lsat_1_v5_gn_1_55260 L. sativa V8
Defline:  (1 of 4) PTHR31587:SF3 - F1K23.6 Genomic Order:  1857
Name:  ? Lsat_1_v5_gn_1_55260 Secondary Identifier:  ? PAC:38944529
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_55260 0.5kb upstream 0.5kb upstream 4392   true Lsat_1_v8_lg_1: 65432099-65436490 Lactuca sativa
Lsat_1_v5_gn_1_55260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 65435991-65436490 Lactuca sativa
Lsat_1_v5_gn_1_55260 0.5kb downstream 0.5kb downstream 4392   true Lsat_1_v8_lg_1: 65431599-65435990 Lactuca sativa
Lsat_1_v5_gn_1_55260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 65431599-65432098 Lactuca sativa
Lsat_1_v5_gn_1_55260 1.0kb upstream 1.0kb upstream 4892   true Lsat_1_v8_lg_1: 65432099-65436990 Lactuca sativa
Lsat_1_v5_gn_1_55260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 65435991-65436990 Lactuca sativa
Lsat_1_v5_gn_1_55260 1.0kb downstream 1.0kb downstream 4892   true Lsat_1_v8_lg_1: 65431099-65435990 Lactuca sativa
Lsat_1_v5_gn_1_55260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 65431099-65432098 Lactuca sativa
Lsat_1_v5_gn_1_55260 2.0kb upstream 2.0kb upstream 5892   true Lsat_1_v8_lg_1: 65432099-65437990 Lactuca sativa
Lsat_1_v5_gn_1_55260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 65435991-65437990 Lactuca sativa
Lsat_1_v5_gn_1_55260 2.0kb downstream 2.0kb downstream 5892   true Lsat_1_v8_lg_1: 65430099-65435990 Lactuca sativa
Lsat_1_v5_gn_1_55260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 65430099-65432098 Lactuca sativa
Lsat_1_v5_gn_1_55260 5.0kb upstream 5.0kb upstream 8892   true Lsat_1_v8_lg_1: 65432099-65440990 Lactuca sativa
Lsat_1_v5_gn_1_55260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 65435991-65440990 Lactuca sativa
Lsat_1_v5_gn_1_55260 5.0kb downstream 5.0kb downstream 8892   true Lsat_1_v8_lg_1: 65427099-65435990 Lactuca sativa
Lsat_1_v5_gn_1_55260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 65427099-65432098 Lactuca sativa
Lsat_1_v5_gn_1_55260 10.0kb upstream 10.0kb upstream 13892   true Lsat_1_v8_lg_1: 65432099-65445990 Lactuca sativa
Lsat_1_v5_gn_1_55260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 65435991-65445990 Lactuca sativa
Lsat_1_v5_gn_1_55260 10.0kb downstream 10.0kb downstream 13892   true Lsat_1_v8_lg_1: 65422099-65435990 Lactuca sativa
Lsat_1_v5_gn_1_55260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 65422099-65432098 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473810 5263 Asterids View MSA
123746028 5271 Pentapetalae View MSA
122795784 5272 Eudicot View MSA
122046084 5273 Angiosperm View MSA
121348772 5274 Embryophyte View MSA
123381008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain