Gene : Lsat_1_v5_gn_1_55640 L. sativa V8
Defline:  (1 of 9) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  1844
Name:  ? Lsat_1_v5_gn_1_55640 Secondary Identifier:  ? PAC:38947077
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_55640 0.5kb upstream 0.5kb upstream 4175   true Lsat_1_v8_lg_1: 65029409-65033583 Lactuca sativa
Lsat_1_v5_gn_1_55640 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 65033084-65033583 Lactuca sativa
Lsat_1_v5_gn_1_55640 0.5kb downstream 0.5kb downstream 4175   true Lsat_1_v8_lg_1: 65028909-65033083 Lactuca sativa
Lsat_1_v5_gn_1_55640 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 65028909-65029408 Lactuca sativa
Lsat_1_v5_gn_1_55640 1.0kb upstream 1.0kb upstream 4675   true Lsat_1_v8_lg_1: 65029409-65034083 Lactuca sativa
Lsat_1_v5_gn_1_55640 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 65033084-65034083 Lactuca sativa
Lsat_1_v5_gn_1_55640 1.0kb downstream 1.0kb downstream 4675   true Lsat_1_v8_lg_1: 65028409-65033083 Lactuca sativa
Lsat_1_v5_gn_1_55640 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 65028409-65029408 Lactuca sativa
Lsat_1_v5_gn_1_55640 2.0kb upstream 2.0kb upstream 5675   true Lsat_1_v8_lg_1: 65029409-65035083 Lactuca sativa
Lsat_1_v5_gn_1_55640 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 65033084-65035083 Lactuca sativa
Lsat_1_v5_gn_1_55640 2.0kb downstream 2.0kb downstream 5675   true Lsat_1_v8_lg_1: 65027409-65033083 Lactuca sativa
Lsat_1_v5_gn_1_55640 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 65027409-65029408 Lactuca sativa
Lsat_1_v5_gn_1_55640 5.0kb upstream 5.0kb upstream 8675   true Lsat_1_v8_lg_1: 65029409-65038083 Lactuca sativa
Lsat_1_v5_gn_1_55640 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 65033084-65038083 Lactuca sativa
Lsat_1_v5_gn_1_55640 5.0kb downstream 5.0kb downstream 8675   true Lsat_1_v8_lg_1: 65024409-65033083 Lactuca sativa
Lsat_1_v5_gn_1_55640 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 65024409-65029408 Lactuca sativa
Lsat_1_v5_gn_1_55640 10.0kb upstream 10.0kb upstream 13675   true Lsat_1_v8_lg_1: 65029409-65043083 Lactuca sativa
Lsat_1_v5_gn_1_55640 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 65033084-65043083 Lactuca sativa
Lsat_1_v5_gn_1_55640 10.0kb downstream 10.0kb downstream 13675   true Lsat_1_v8_lg_1: 65019409-65033083 Lactuca sativa
Lsat_1_v5_gn_1_55640 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 65019409-65029408 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468676 5263 Asterids View MSA
123737648 5271 Pentapetalae View MSA
122793672 5272 Eudicot View MSA
122045784 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain