Gene : Lsat_1_v5_gn_1_40680 L. sativa V8
Defline:  (1 of 3) PTHR23068//PTHR23068:SF11 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1367
Name:  ? Lsat_1_v5_gn_1_40680 Secondary Identifier:  ? PAC:38946442
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_40680 0.5kb upstream 0.5kb upstream 4397   true Lsat_1_v8_lg_1: 45725761-45730157 Lactuca sativa
Lsat_1_v5_gn_1_40680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 45725761-45726260 Lactuca sativa
Lsat_1_v5_gn_1_40680 0.5kb downstream 0.5kb downstream 4397   true Lsat_1_v8_lg_1: 45726261-45730657 Lactuca sativa
Lsat_1_v5_gn_1_40680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 45730158-45730657 Lactuca sativa
Lsat_1_v5_gn_1_40680 1.0kb upstream 1.0kb upstream 4897   true Lsat_1_v8_lg_1: 45725261-45730157 Lactuca sativa
Lsat_1_v5_gn_1_40680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 45725261-45726260 Lactuca sativa
Lsat_1_v5_gn_1_40680 1.0kb downstream 1.0kb downstream 4897   true Lsat_1_v8_lg_1: 45726261-45731157 Lactuca sativa
Lsat_1_v5_gn_1_40680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 45730158-45731157 Lactuca sativa
Lsat_1_v5_gn_1_40680 2.0kb upstream 2.0kb upstream 5897   true Lsat_1_v8_lg_1: 45724261-45730157 Lactuca sativa
Lsat_1_v5_gn_1_40680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 45724261-45726260 Lactuca sativa
Lsat_1_v5_gn_1_40680 2.0kb downstream 2.0kb downstream 5897   true Lsat_1_v8_lg_1: 45726261-45732157 Lactuca sativa
Lsat_1_v5_gn_1_40680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 45730158-45732157 Lactuca sativa
Lsat_1_v5_gn_1_40680 5.0kb upstream 5.0kb upstream 8897   true Lsat_1_v8_lg_1: 45721261-45730157 Lactuca sativa
Lsat_1_v5_gn_1_40680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 45721261-45726260 Lactuca sativa
Lsat_1_v5_gn_1_40680 5.0kb downstream 5.0kb downstream 8897   true Lsat_1_v8_lg_1: 45726261-45735157 Lactuca sativa
Lsat_1_v5_gn_1_40680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 45730158-45735157 Lactuca sativa
Lsat_1_v5_gn_1_40680 10.0kb upstream 10.0kb upstream 13897   true Lsat_1_v8_lg_1: 45716261-45730157 Lactuca sativa
Lsat_1_v5_gn_1_40680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 45716261-45726260 Lactuca sativa
Lsat_1_v5_gn_1_40680 10.0kb downstream 10.0kb downstream 13897   true Lsat_1_v8_lg_1: 45726261-45740157 Lactuca sativa
Lsat_1_v5_gn_1_40680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 45730158-45740157 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471653 5263 Asterids View MSA
123739152 5271 Pentapetalae View MSA
122785997 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain