Gene : Lsat_1_v5_gn_1_42061 L. sativa V8
Defline:  (1 of 6) KOG1356 - Putative transcription factor 5qNCA, contains JmjC domain Genomic Order:  1426
Name:  ? Lsat_1_v5_gn_1_42061 Secondary Identifier:  ? PAC:38948645
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_42061 0.5kb upstream 0.5kb upstream 4307   true Lsat_1_v8_lg_1: 48026795-48031101 Lactuca sativa
Lsat_1_v5_gn_1_42061 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 48026795-48027294 Lactuca sativa
Lsat_1_v5_gn_1_42061 0.5kb downstream 0.5kb downstream 4307   true Lsat_1_v8_lg_1: 48027295-48031601 Lactuca sativa
Lsat_1_v5_gn_1_42061 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 48031102-48031601 Lactuca sativa
Lsat_1_v5_gn_1_42061 1.0kb upstream 1.0kb upstream 4807   true Lsat_1_v8_lg_1: 48026295-48031101 Lactuca sativa
Lsat_1_v5_gn_1_42061 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 48026295-48027294 Lactuca sativa
Lsat_1_v5_gn_1_42061 1.0kb downstream 1.0kb downstream 4807   true Lsat_1_v8_lg_1: 48027295-48032101 Lactuca sativa
Lsat_1_v5_gn_1_42061 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 48031102-48032101 Lactuca sativa
Lsat_1_v5_gn_1_42061 2.0kb upstream 2.0kb upstream 5807   true Lsat_1_v8_lg_1: 48025295-48031101 Lactuca sativa
Lsat_1_v5_gn_1_42061 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 48025295-48027294 Lactuca sativa
Lsat_1_v5_gn_1_42061 2.0kb downstream 2.0kb downstream 5807   true Lsat_1_v8_lg_1: 48027295-48033101 Lactuca sativa
Lsat_1_v5_gn_1_42061 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 48031102-48033101 Lactuca sativa
Lsat_1_v5_gn_1_42061 5.0kb upstream 5.0kb upstream 8807   true Lsat_1_v8_lg_1: 48022295-48031101 Lactuca sativa
Lsat_1_v5_gn_1_42061 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 48022295-48027294 Lactuca sativa
Lsat_1_v5_gn_1_42061 5.0kb downstream 5.0kb downstream 8807   true Lsat_1_v8_lg_1: 48027295-48036101 Lactuca sativa
Lsat_1_v5_gn_1_42061 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 48031102-48036101 Lactuca sativa
Lsat_1_v5_gn_1_42061 10.0kb upstream 10.0kb upstream 13807   true Lsat_1_v8_lg_1: 48017295-48031101 Lactuca sativa
Lsat_1_v5_gn_1_42061 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 48017295-48027294 Lactuca sativa
Lsat_1_v5_gn_1_42061 10.0kb downstream 10.0kb downstream 13807   true Lsat_1_v8_lg_1: 48027295-48041101 Lactuca sativa
Lsat_1_v5_gn_1_42061 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 48031102-48041101 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480798 5263 Asterids View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain