Gene : Lsat_1_v5_gn_1_43780 L. sativa V8
Defline:  (1 of 1) PTHR22884//PTHR22884:SF351 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  1515
Name:  ? Lsat_1_v5_gn_1_43780 Secondary Identifier:  ? PAC:38943571
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_43780 0.5kb upstream 0.5kb upstream 8306   true Lsat_1_v8_lg_1: 50843078-50851383 Lactuca sativa
Lsat_1_v5_gn_1_43780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 50843078-50843577 Lactuca sativa
Lsat_1_v5_gn_1_43780 0.5kb downstream 0.5kb downstream 8306   true Lsat_1_v8_lg_1: 50843578-50851883 Lactuca sativa
Lsat_1_v5_gn_1_43780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 50851384-50851883 Lactuca sativa
Lsat_1_v5_gn_1_43780 1.0kb upstream 1.0kb upstream 8806   true Lsat_1_v8_lg_1: 50842578-50851383 Lactuca sativa
Lsat_1_v5_gn_1_43780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 50842578-50843577 Lactuca sativa
Lsat_1_v5_gn_1_43780 1.0kb downstream 1.0kb downstream 8806   true Lsat_1_v8_lg_1: 50843578-50852383 Lactuca sativa
Lsat_1_v5_gn_1_43780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 50851384-50852383 Lactuca sativa
Lsat_1_v5_gn_1_43780 2.0kb upstream 2.0kb upstream 9806   true Lsat_1_v8_lg_1: 50841578-50851383 Lactuca sativa
Lsat_1_v5_gn_1_43780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 50841578-50843577 Lactuca sativa
Lsat_1_v5_gn_1_43780 2.0kb downstream 2.0kb downstream 9806   true Lsat_1_v8_lg_1: 50843578-50853383 Lactuca sativa
Lsat_1_v5_gn_1_43780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 50851384-50853383 Lactuca sativa
Lsat_1_v5_gn_1_43780 5.0kb upstream 5.0kb upstream 12806   true Lsat_1_v8_lg_1: 50838578-50851383 Lactuca sativa
Lsat_1_v5_gn_1_43780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 50838578-50843577 Lactuca sativa
Lsat_1_v5_gn_1_43780 5.0kb downstream 5.0kb downstream 12806   true Lsat_1_v8_lg_1: 50843578-50856383 Lactuca sativa
Lsat_1_v5_gn_1_43780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 50851384-50856383 Lactuca sativa
Lsat_1_v5_gn_1_43780 10.0kb upstream 10.0kb upstream 17806   true Lsat_1_v8_lg_1: 50833578-50851383 Lactuca sativa
Lsat_1_v5_gn_1_43780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 50833578-50843577 Lactuca sativa
Lsat_1_v5_gn_1_43780 10.0kb downstream 10.0kb downstream 17806   true Lsat_1_v8_lg_1: 50843578-50861383 Lactuca sativa
Lsat_1_v5_gn_1_43780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 50851384-50861383 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121451993 5263 Asterids View MSA
123742870 5271 Pentapetalae View MSA
122794849 5272 Eudicot View MSA
122049261 5273 Angiosperm View MSA
121349718 5274 Embryophyte View MSA
123381414 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain