Gene : Lsat_1_v5_gn_1_45101 L. sativa V8
Defline:  (1 of 1) PTHR11071//PTHR11071:SF255//PTHR23111//PTHR23111:SF21//PTHR23315 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYLPROLYL ISOMERASE // ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED // BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING Genomic Order:  1440
Name:  ? Lsat_1_v5_gn_1_45101 Secondary Identifier:  ? PAC:38943395
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_45101 0.5kb upstream 0.5kb upstream 14473   true Lsat_1_v8_lg_1: 48314322-48328794 Lactuca sativa
Lsat_1_v5_gn_1_45101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 48314322-48314821 Lactuca sativa
Lsat_1_v5_gn_1_45101 0.5kb downstream 0.5kb downstream 14473   true Lsat_1_v8_lg_1: 48314822-48329294 Lactuca sativa
Lsat_1_v5_gn_1_45101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 48328795-48329294 Lactuca sativa
Lsat_1_v5_gn_1_45101 1.0kb upstream 1.0kb upstream 14973   true Lsat_1_v8_lg_1: 48313822-48328794 Lactuca sativa
Lsat_1_v5_gn_1_45101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 48313822-48314821 Lactuca sativa
Lsat_1_v5_gn_1_45101 1.0kb downstream 1.0kb downstream 14973   true Lsat_1_v8_lg_1: 48314822-48329794 Lactuca sativa
Lsat_1_v5_gn_1_45101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 48328795-48329794 Lactuca sativa
Lsat_1_v5_gn_1_45101 2.0kb upstream 2.0kb upstream 15973   true Lsat_1_v8_lg_1: 48312822-48328794 Lactuca sativa
Lsat_1_v5_gn_1_45101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 48312822-48314821 Lactuca sativa
Lsat_1_v5_gn_1_45101 2.0kb downstream 2.0kb downstream 15973   true Lsat_1_v8_lg_1: 48314822-48330794 Lactuca sativa
Lsat_1_v5_gn_1_45101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 48328795-48330794 Lactuca sativa
Lsat_1_v5_gn_1_45101 5.0kb upstream 5.0kb upstream 18973   true Lsat_1_v8_lg_1: 48309822-48328794 Lactuca sativa
Lsat_1_v5_gn_1_45101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 48309822-48314821 Lactuca sativa
Lsat_1_v5_gn_1_45101 5.0kb downstream 5.0kb downstream 18973   true Lsat_1_v8_lg_1: 48314822-48333794 Lactuca sativa
Lsat_1_v5_gn_1_45101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 48328795-48333794 Lactuca sativa
Lsat_1_v5_gn_1_45101 10.0kb upstream 10.0kb upstream 23973   true Lsat_1_v8_lg_1: 48304822-48328794 Lactuca sativa
Lsat_1_v5_gn_1_45101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 48304822-48314821 Lactuca sativa
Lsat_1_v5_gn_1_45101 10.0kb downstream 10.0kb downstream 23973   true Lsat_1_v8_lg_1: 48314822-48338794 Lactuca sativa
Lsat_1_v5_gn_1_45101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 48328795-48338794 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040927 5273 Angiosperm View MSA
121473844 5263 Asterids View MSA
123740248 5271 Pentapetalae View MSA
122791283 5272 Eudicot View MSA
123428973 5275 Viridiplantae View MSA
121347265 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain