Gene : Lsat_1_v5_gn_1_68240 L. sativa V8
Defline:  (1 of 2) PTHR11909:SF146 - CASEIN KINASE-LIKE PROTEIN Genomic Order:  2239
Name:  ? Lsat_1_v5_gn_1_68240 Secondary Identifier:  ? PAC:38946056
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_68240 0.5kb upstream 0.5kb upstream 5709   true Lsat_1_v8_lg_1: 79788460-79794168 Lactuca sativa
Lsat_1_v5_gn_1_68240 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 79788460-79788959 Lactuca sativa
Lsat_1_v5_gn_1_68240 0.5kb downstream 0.5kb downstream 5709   true Lsat_1_v8_lg_1: 79788960-79794668 Lactuca sativa
Lsat_1_v5_gn_1_68240 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 79794169-79794668 Lactuca sativa
Lsat_1_v5_gn_1_68240 1.0kb upstream 1.0kb upstream 6209   true Lsat_1_v8_lg_1: 79787960-79794168 Lactuca sativa
Lsat_1_v5_gn_1_68240 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 79787960-79788959 Lactuca sativa
Lsat_1_v5_gn_1_68240 1.0kb downstream 1.0kb downstream 6209   true Lsat_1_v8_lg_1: 79788960-79795168 Lactuca sativa
Lsat_1_v5_gn_1_68240 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 79794169-79795168 Lactuca sativa
Lsat_1_v5_gn_1_68240 2.0kb upstream 2.0kb upstream 7209   true Lsat_1_v8_lg_1: 79786960-79794168 Lactuca sativa
Lsat_1_v5_gn_1_68240 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 79786960-79788959 Lactuca sativa
Lsat_1_v5_gn_1_68240 2.0kb downstream 2.0kb downstream 7209   true Lsat_1_v8_lg_1: 79788960-79796168 Lactuca sativa
Lsat_1_v5_gn_1_68240 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 79794169-79796168 Lactuca sativa
Lsat_1_v5_gn_1_68240 5.0kb upstream 5.0kb upstream 10209   true Lsat_1_v8_lg_1: 79783960-79794168 Lactuca sativa
Lsat_1_v5_gn_1_68240 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 79783960-79788959 Lactuca sativa
Lsat_1_v5_gn_1_68240 5.0kb downstream 5.0kb downstream 10209   true Lsat_1_v8_lg_1: 79788960-79799168 Lactuca sativa
Lsat_1_v5_gn_1_68240 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 79794169-79799168 Lactuca sativa
Lsat_1_v5_gn_1_68240 10.0kb upstream 10.0kb upstream 15209   true Lsat_1_v8_lg_1: 79778960-79794168 Lactuca sativa
Lsat_1_v5_gn_1_68240 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 79778960-79788959 Lactuca sativa
Lsat_1_v5_gn_1_68240 10.0kb downstream 10.0kb downstream 15209   true Lsat_1_v8_lg_1: 79788960-79804168 Lactuca sativa
Lsat_1_v5_gn_1_68240 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 79794169-79804168 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464289 5263 Asterids View MSA
123746473 5271 Pentapetalae View MSA
122796123 5272 Eudicot View MSA
122047943 5273 Angiosperm View MSA
121348190 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain