Gene : Lsat_1_v5_gn_1_920 L. sativa V8
Defline:  (1 of 6) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B Genomic Order:  33
Name:  ? Lsat_1_v5_gn_1_920 Secondary Identifier:  ? PAC:38948848
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_920 0.5kb upstream 0.5kb upstream 11811   true Lsat_1_v8_lg_1: 1671392-1683202 Lactuca sativa
Lsat_1_v5_gn_1_920 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 1671392-1671891 Lactuca sativa
Lsat_1_v5_gn_1_920 0.5kb downstream 0.5kb downstream 11811   true Lsat_1_v8_lg_1: 1671892-1683702 Lactuca sativa
Lsat_1_v5_gn_1_920 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 1683203-1683702 Lactuca sativa
Lsat_1_v5_gn_1_920 1.0kb upstream 1.0kb upstream 12311   true Lsat_1_v8_lg_1: 1670892-1683202 Lactuca sativa
Lsat_1_v5_gn_1_920 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 1670892-1671891 Lactuca sativa
Lsat_1_v5_gn_1_920 1.0kb downstream 1.0kb downstream 12311   true Lsat_1_v8_lg_1: 1671892-1684202 Lactuca sativa
Lsat_1_v5_gn_1_920 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 1683203-1684202 Lactuca sativa
Lsat_1_v5_gn_1_920 2.0kb upstream 2.0kb upstream 13311   true Lsat_1_v8_lg_1: 1669892-1683202 Lactuca sativa
Lsat_1_v5_gn_1_920 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 1669892-1671891 Lactuca sativa
Lsat_1_v5_gn_1_920 2.0kb downstream 2.0kb downstream 13311   true Lsat_1_v8_lg_1: 1671892-1685202 Lactuca sativa
Lsat_1_v5_gn_1_920 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 1683203-1685202 Lactuca sativa
Lsat_1_v5_gn_1_920 5.0kb upstream 5.0kb upstream 16311   true Lsat_1_v8_lg_1: 1666892-1683202 Lactuca sativa
Lsat_1_v5_gn_1_920 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 1666892-1671891 Lactuca sativa
Lsat_1_v5_gn_1_920 5.0kb downstream 5.0kb downstream 16311   true Lsat_1_v8_lg_1: 1671892-1688202 Lactuca sativa
Lsat_1_v5_gn_1_920 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 1683203-1688202 Lactuca sativa
Lsat_1_v5_gn_1_920 10.0kb upstream 10.0kb upstream 21311   true Lsat_1_v8_lg_1: 1661892-1683202 Lactuca sativa
Lsat_1_v5_gn_1_920 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 1661892-1671891 Lactuca sativa
Lsat_1_v5_gn_1_920 10.0kb downstream 10.0kb downstream 21311   true Lsat_1_v8_lg_1: 1671892-1693202 Lactuca sativa
Lsat_1_v5_gn_1_920 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 1683203-1693202 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041153 5273 Angiosperm View MSA
121476882 5263 Asterids View MSA
123741436 5271 Pentapetalae View MSA
122791943 5272 Eudicot View MSA
121347296 5274 Embryophyte View MSA
123380523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain