Gene : Lsat_1_v5_gn_2_104600 L. sativa V8
Defline:  (1 of 2) 4.1.1.33 - Diphosphomevalonate decarboxylase / Mevalonate pyrophosphate decarboxylase Genomic Order:  3023
Name:  ? Lsat_1_v5_gn_2_104600 Secondary Identifier:  ? PAC:38959941
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5910 Lactuca sativa pathologic  
Lsativa PWY-922 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_104600 0.5kb upstream 0.5kb upstream 3207   true Lsat_1_v8_lg_2: 182787406-182790612 Lactuca sativa
Lsat_1_v5_gn_2_104600 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 182790113-182790612 Lactuca sativa
Lsat_1_v5_gn_2_104600 0.5kb downstream 0.5kb downstream 3207   true Lsat_1_v8_lg_2: 182786906-182790112 Lactuca sativa
Lsat_1_v5_gn_2_104600 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 182786906-182787405 Lactuca sativa
Lsat_1_v5_gn_2_104600 1.0kb upstream 1.0kb upstream 3707   true Lsat_1_v8_lg_2: 182787406-182791112 Lactuca sativa
Lsat_1_v5_gn_2_104600 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 182790113-182791112 Lactuca sativa
Lsat_1_v5_gn_2_104600 1.0kb downstream 1.0kb downstream 3707   true Lsat_1_v8_lg_2: 182786406-182790112 Lactuca sativa
Lsat_1_v5_gn_2_104600 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 182786406-182787405 Lactuca sativa
Lsat_1_v5_gn_2_104600 2.0kb upstream 2.0kb upstream 4707   true Lsat_1_v8_lg_2: 182787406-182792112 Lactuca sativa
Lsat_1_v5_gn_2_104600 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 182790113-182792112 Lactuca sativa
Lsat_1_v5_gn_2_104600 2.0kb downstream 2.0kb downstream 4707   true Lsat_1_v8_lg_2: 182785406-182790112 Lactuca sativa
Lsat_1_v5_gn_2_104600 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 182785406-182787405 Lactuca sativa
Lsat_1_v5_gn_2_104600 5.0kb upstream 5.0kb upstream 7707   true Lsat_1_v8_lg_2: 182787406-182795112 Lactuca sativa
Lsat_1_v5_gn_2_104600 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 182790113-182795112 Lactuca sativa
Lsat_1_v5_gn_2_104600 5.0kb downstream 5.0kb downstream 7707   true Lsat_1_v8_lg_2: 182782406-182790112 Lactuca sativa
Lsat_1_v5_gn_2_104600 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 182782406-182787405 Lactuca sativa
Lsat_1_v5_gn_2_104600 10.0kb upstream 10.0kb upstream 12707   true Lsat_1_v8_lg_2: 182787406-182800112 Lactuca sativa
Lsat_1_v5_gn_2_104600 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 182790113-182800112 Lactuca sativa
Lsat_1_v5_gn_2_104600 10.0kb downstream 10.0kb downstream 12707   true Lsat_1_v8_lg_2: 182777406-182790112 Lactuca sativa
Lsat_1_v5_gn_2_104600 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 182777406-182787405 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040965 5273 Angiosperm View MSA
121468547 5263 Asterids View MSA
123742848 5271 Pentapetalae View MSA
122793764 5272 Eudicot View MSA
121347307 5274 Embryophyte View MSA
123380524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain