Gene : Lsat_1_v5_gn_2_106721 L. sativa V8
Defline:  (1 of 1) PF00004//PF02359//PF02933//PF07724 - ATPase family associated with various cellular activities (AAA) (AAA) // Cell division protein 48 (CDC48), N-terminal domain (CDC48_N) // Cell division protein 48 (CDC48), domain 2 (CDC48_2) // AAA domain (Cdc48 subfamily) (AAA_2) Genomic Order:  3146
Name:  ? Lsat_1_v5_gn_2_106721 Secondary Identifier:  ? PAC:38957346
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_106721 0.5kb upstream 0.5kb upstream 2725   true Lsat_1_v8_lg_2: 186064745-186067469 Lactuca sativa
Lsat_1_v5_gn_2_106721 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 186064745-186065244 Lactuca sativa
Lsat_1_v5_gn_2_106721 0.5kb downstream 0.5kb downstream 2725   true Lsat_1_v8_lg_2: 186065245-186067969 Lactuca sativa
Lsat_1_v5_gn_2_106721 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 186067470-186067969 Lactuca sativa
Lsat_1_v5_gn_2_106721 1.0kb upstream 1.0kb upstream 3225   true Lsat_1_v8_lg_2: 186064245-186067469 Lactuca sativa
Lsat_1_v5_gn_2_106721 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 186064245-186065244 Lactuca sativa
Lsat_1_v5_gn_2_106721 1.0kb downstream 1.0kb downstream 3225   true Lsat_1_v8_lg_2: 186065245-186068469 Lactuca sativa
Lsat_1_v5_gn_2_106721 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 186067470-186068469 Lactuca sativa
Lsat_1_v5_gn_2_106721 2.0kb upstream 2.0kb upstream 4225   true Lsat_1_v8_lg_2: 186063245-186067469 Lactuca sativa
Lsat_1_v5_gn_2_106721 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 186063245-186065244 Lactuca sativa
Lsat_1_v5_gn_2_106721 2.0kb downstream 2.0kb downstream 4225   true Lsat_1_v8_lg_2: 186065245-186069469 Lactuca sativa
Lsat_1_v5_gn_2_106721 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 186067470-186069469 Lactuca sativa
Lsat_1_v5_gn_2_106721 5.0kb upstream 5.0kb upstream 7225   true Lsat_1_v8_lg_2: 186060245-186067469 Lactuca sativa
Lsat_1_v5_gn_2_106721 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 186060245-186065244 Lactuca sativa
Lsat_1_v5_gn_2_106721 5.0kb downstream 5.0kb downstream 7225   true Lsat_1_v8_lg_2: 186065245-186072469 Lactuca sativa
Lsat_1_v5_gn_2_106721 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 186067470-186072469 Lactuca sativa
Lsat_1_v5_gn_2_106721 10.0kb upstream 10.0kb upstream 12225   true Lsat_1_v8_lg_2: 186055245-186067469 Lactuca sativa
Lsat_1_v5_gn_2_106721 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 186055245-186065244 Lactuca sativa
Lsat_1_v5_gn_2_106721 10.0kb downstream 10.0kb downstream 12225   true Lsat_1_v8_lg_2: 186065245-186077469 Lactuca sativa
Lsat_1_v5_gn_2_106721 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 186067470-186077469 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482025 5263 Asterids View MSA
123753569 5271 Pentapetalae View MSA
122797927 5272 Eudicot View MSA
122051596 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121350518 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain