Gene : Lsat_1_v5_gn_2_127641 L. sativa V8
Defline:  (1 of 3) PTHR33921//PTHR33921:SF3 - FAMILY NOT NAMED // CALVIN CYCLE PROTEIN CP12-3, CHLOROPLASTIC Genomic Order:  3767
Name:  ? Lsat_1_v5_gn_2_127641 Secondary Identifier:  ? PAC:38962329
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_127641 0.5kb upstream 0.5kb upstream 881   true Lsat_1_v8_lg_2: 206187567-206188447 Lactuca sativa
Lsat_1_v5_gn_2_127641 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 206187567-206188066 Lactuca sativa
Lsat_1_v5_gn_2_127641 0.5kb downstream 0.5kb downstream 881   true Lsat_1_v8_lg_2: 206188067-206188947 Lactuca sativa
Lsat_1_v5_gn_2_127641 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 206188448-206188947 Lactuca sativa
Lsat_1_v5_gn_2_127641 1.0kb upstream 1.0kb upstream 1381   true Lsat_1_v8_lg_2: 206187067-206188447 Lactuca sativa
Lsat_1_v5_gn_2_127641 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 206187067-206188066 Lactuca sativa
Lsat_1_v5_gn_2_127641 1.0kb downstream 1.0kb downstream 1381   true Lsat_1_v8_lg_2: 206188067-206189447 Lactuca sativa
Lsat_1_v5_gn_2_127641 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 206188448-206189447 Lactuca sativa
Lsat_1_v5_gn_2_127641 2.0kb upstream 2.0kb upstream 2381   true Lsat_1_v8_lg_2: 206186067-206188447 Lactuca sativa
Lsat_1_v5_gn_2_127641 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 206186067-206188066 Lactuca sativa
Lsat_1_v5_gn_2_127641 2.0kb downstream 2.0kb downstream 2381   true Lsat_1_v8_lg_2: 206188067-206190447 Lactuca sativa
Lsat_1_v5_gn_2_127641 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 206188448-206190447 Lactuca sativa
Lsat_1_v5_gn_2_127641 5.0kb upstream 5.0kb upstream 5381   true Lsat_1_v8_lg_2: 206183067-206188447 Lactuca sativa
Lsat_1_v5_gn_2_127641 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 206183067-206188066 Lactuca sativa
Lsat_1_v5_gn_2_127641 5.0kb downstream 5.0kb downstream 5381   true Lsat_1_v8_lg_2: 206188067-206193447 Lactuca sativa
Lsat_1_v5_gn_2_127641 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 206188448-206193447 Lactuca sativa
Lsat_1_v5_gn_2_127641 10.0kb upstream 10.0kb upstream 10381   true Lsat_1_v8_lg_2: 206178067-206188447 Lactuca sativa
Lsat_1_v5_gn_2_127641 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 206178067-206188066 Lactuca sativa
Lsat_1_v5_gn_2_127641 10.0kb downstream 10.0kb downstream 10381   true Lsat_1_v8_lg_2: 206188067-206198447 Lactuca sativa
Lsat_1_v5_gn_2_127641 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 206188448-206198447 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781832 5273 Angiosperm View MSA
121452431 5263 Asterids View MSA
123750712 5271 Pentapetalae View MSA
122773812 5272 Eudicot View MSA
121053393 5274 Embryophyte View MSA
123093416 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain