Gene : Lsat_1_v5_gn_2_133380 L. sativa V8
Defline:  (1 of 219) PF00847 - AP2 domain (AP2) Genomic Order:  3905
Name:  ? Lsat_1_v5_gn_2_133380 Secondary Identifier:  ? PAC:38962760
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_133380 0.5kb upstream 0.5kb upstream 1073   true Lsat_1_v8_lg_2: 210621304-210622376 Lactuca sativa
Lsat_1_v5_gn_2_133380 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 210621877-210622376 Lactuca sativa
Lsat_1_v5_gn_2_133380 0.5kb downstream 0.5kb downstream 1073   true Lsat_1_v8_lg_2: 210620804-210621876 Lactuca sativa
Lsat_1_v5_gn_2_133380 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 210620804-210621303 Lactuca sativa
Lsat_1_v5_gn_2_133380 1.0kb upstream 1.0kb upstream 1573   true Lsat_1_v8_lg_2: 210621304-210622876 Lactuca sativa
Lsat_1_v5_gn_2_133380 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 210621877-210622876 Lactuca sativa
Lsat_1_v5_gn_2_133380 1.0kb downstream 1.0kb downstream 1573   true Lsat_1_v8_lg_2: 210620304-210621876 Lactuca sativa
Lsat_1_v5_gn_2_133380 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 210620304-210621303 Lactuca sativa
Lsat_1_v5_gn_2_133380 2.0kb upstream 2.0kb upstream 2573   true Lsat_1_v8_lg_2: 210621304-210623876 Lactuca sativa
Lsat_1_v5_gn_2_133380 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 210621877-210623876 Lactuca sativa
Lsat_1_v5_gn_2_133380 2.0kb downstream 2.0kb downstream 2573   true Lsat_1_v8_lg_2: 210619304-210621876 Lactuca sativa
Lsat_1_v5_gn_2_133380 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 210619304-210621303 Lactuca sativa
Lsat_1_v5_gn_2_133380 5.0kb upstream 5.0kb upstream 5573   true Lsat_1_v8_lg_2: 210621304-210626876 Lactuca sativa
Lsat_1_v5_gn_2_133380 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 210621877-210626876 Lactuca sativa
Lsat_1_v5_gn_2_133380 5.0kb downstream 5.0kb downstream 5573   true Lsat_1_v8_lg_2: 210616304-210621876 Lactuca sativa
Lsat_1_v5_gn_2_133380 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 210616304-210621303 Lactuca sativa
Lsat_1_v5_gn_2_133380 10.0kb upstream 10.0kb upstream 10573   true Lsat_1_v8_lg_2: 210621304-210631876 Lactuca sativa
Lsat_1_v5_gn_2_133380 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 210621877-210631876 Lactuca sativa
Lsat_1_v5_gn_2_133380 10.0kb downstream 10.0kb downstream 10573   true Lsat_1_v8_lg_2: 210611304-210621876 Lactuca sativa
Lsat_1_v5_gn_2_133380 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 210611304-210621303 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475276 5263 Asterids View MSA
123747343 5271 Pentapetalae View MSA
122787056 5272 Eudicot View MSA
122049572 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain