Gene : Lsat_1_v5_gn_2_108021 L. sativa V8
Defline:  (1 of 1) PTHR33372//PTHR33372:SF1 - FAMILY NOT NAMED // CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Genomic Order:  3109
Name:  ? Lsat_1_v5_gn_2_108021 Secondary Identifier:  ? PAC:38959820
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_108021 0.5kb upstream 0.5kb upstream 2887   true Lsat_1_v8_lg_2: 184701554-184704440 Lactuca sativa
Lsat_1_v5_gn_2_108021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 184703941-184704440 Lactuca sativa
Lsat_1_v5_gn_2_108021 0.5kb downstream 0.5kb downstream 2887   true Lsat_1_v8_lg_2: 184701054-184703940 Lactuca sativa
Lsat_1_v5_gn_2_108021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 184701054-184701553 Lactuca sativa
Lsat_1_v5_gn_2_108021 1.0kb upstream 1.0kb upstream 3387   true Lsat_1_v8_lg_2: 184701554-184704940 Lactuca sativa
Lsat_1_v5_gn_2_108021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 184703941-184704940 Lactuca sativa
Lsat_1_v5_gn_2_108021 1.0kb downstream 1.0kb downstream 3387   true Lsat_1_v8_lg_2: 184700554-184703940 Lactuca sativa
Lsat_1_v5_gn_2_108021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 184700554-184701553 Lactuca sativa
Lsat_1_v5_gn_2_108021 2.0kb upstream 2.0kb upstream 4387   true Lsat_1_v8_lg_2: 184701554-184705940 Lactuca sativa
Lsat_1_v5_gn_2_108021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 184703941-184705940 Lactuca sativa
Lsat_1_v5_gn_2_108021 2.0kb downstream 2.0kb downstream 4387   true Lsat_1_v8_lg_2: 184699554-184703940 Lactuca sativa
Lsat_1_v5_gn_2_108021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 184699554-184701553 Lactuca sativa
Lsat_1_v5_gn_2_108021 5.0kb upstream 5.0kb upstream 7387   true Lsat_1_v8_lg_2: 184701554-184708940 Lactuca sativa
Lsat_1_v5_gn_2_108021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 184703941-184708940 Lactuca sativa
Lsat_1_v5_gn_2_108021 5.0kb downstream 5.0kb downstream 7387   true Lsat_1_v8_lg_2: 184696554-184703940 Lactuca sativa
Lsat_1_v5_gn_2_108021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 184696554-184701553 Lactuca sativa
Lsat_1_v5_gn_2_108021 10.0kb upstream 10.0kb upstream 12387   true Lsat_1_v8_lg_2: 184701554-184713940 Lactuca sativa
Lsat_1_v5_gn_2_108021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 184703941-184713940 Lactuca sativa
Lsat_1_v5_gn_2_108021 10.0kb downstream 10.0kb downstream 12387   true Lsat_1_v8_lg_2: 184691554-184703940 Lactuca sativa
Lsat_1_v5_gn_2_108021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 184691554-184701553 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471620 5263 Asterids View MSA
123738014 5271 Pentapetalae View MSA
122791822 5272 Eudicot View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain