Gene : Lsat_1_v5_gn_2_110120 L. sativa V8
Defline:  (1 of 1) K18732 - SAP domain-containing ribonucleoprotein (SARNP, CIP29, THO1) Genomic Order:  3208
Name:  ? Lsat_1_v5_gn_2_110120 Secondary Identifier:  ? PAC:38958379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_110120 0.5kb upstream 0.5kb upstream 4352   true Lsat_1_v8_lg_2: 188270011-188274362 Lactuca sativa
Lsat_1_v5_gn_2_110120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 188270011-188270510 Lactuca sativa
Lsat_1_v5_gn_2_110120 0.5kb downstream 0.5kb downstream 4352   true Lsat_1_v8_lg_2: 188270511-188274862 Lactuca sativa
Lsat_1_v5_gn_2_110120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 188274363-188274862 Lactuca sativa
Lsat_1_v5_gn_2_110120 1.0kb upstream 1.0kb upstream 4852   true Lsat_1_v8_lg_2: 188269511-188274362 Lactuca sativa
Lsat_1_v5_gn_2_110120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 188269511-188270510 Lactuca sativa
Lsat_1_v5_gn_2_110120 1.0kb downstream 1.0kb downstream 4852   true Lsat_1_v8_lg_2: 188270511-188275362 Lactuca sativa
Lsat_1_v5_gn_2_110120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 188274363-188275362 Lactuca sativa
Lsat_1_v5_gn_2_110120 2.0kb upstream 2.0kb upstream 5852   true Lsat_1_v8_lg_2: 188268511-188274362 Lactuca sativa
Lsat_1_v5_gn_2_110120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 188268511-188270510 Lactuca sativa
Lsat_1_v5_gn_2_110120 2.0kb downstream 2.0kb downstream 5852   true Lsat_1_v8_lg_2: 188270511-188276362 Lactuca sativa
Lsat_1_v5_gn_2_110120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 188274363-188276362 Lactuca sativa
Lsat_1_v5_gn_2_110120 5.0kb upstream 5.0kb upstream 8852   true Lsat_1_v8_lg_2: 188265511-188274362 Lactuca sativa
Lsat_1_v5_gn_2_110120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 188265511-188270510 Lactuca sativa
Lsat_1_v5_gn_2_110120 5.0kb downstream 5.0kb downstream 8852   true Lsat_1_v8_lg_2: 188270511-188279362 Lactuca sativa
Lsat_1_v5_gn_2_110120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 188274363-188279362 Lactuca sativa
Lsat_1_v5_gn_2_110120 10.0kb upstream 10.0kb upstream 13852   true Lsat_1_v8_lg_2: 188260511-188274362 Lactuca sativa
Lsat_1_v5_gn_2_110120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 188260511-188270510 Lactuca sativa
Lsat_1_v5_gn_2_110120 10.0kb downstream 10.0kb downstream 13852   true Lsat_1_v8_lg_2: 188270511-188284362 Lactuca sativa
Lsat_1_v5_gn_2_110120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 188274363-188284362 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478087 5263 Asterids View MSA
123742153 5271 Pentapetalae View MSA
122787533 5272 Eudicot View MSA
122051388 5273 Angiosperm View MSA
121344836 5274 Embryophyte View MSA
123428142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain