Gene : Lsat_1_v5_gn_2_110540 L. sativa V8
Genomic Order:  3246 Name:  ? Lsat_1_v5_gn_2_110540
Secondary Identifier:  ? PAC:38962643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_110540 0.5kb upstream 0.5kb upstream 3645   true Lsat_1_v8_lg_2: 189829075-189832719 Lactuca sativa
Lsat_1_v5_gn_2_110540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 189832220-189832719 Lactuca sativa
Lsat_1_v5_gn_2_110540 0.5kb downstream 0.5kb downstream 3645   true Lsat_1_v8_lg_2: 189828575-189832219 Lactuca sativa
Lsat_1_v5_gn_2_110540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 189828575-189829074 Lactuca sativa
Lsat_1_v5_gn_2_110540 1.0kb upstream 1.0kb upstream 4145   true Lsat_1_v8_lg_2: 189829075-189833219 Lactuca sativa
Lsat_1_v5_gn_2_110540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 189832220-189833219 Lactuca sativa
Lsat_1_v5_gn_2_110540 1.0kb downstream 1.0kb downstream 4145   true Lsat_1_v8_lg_2: 189828075-189832219 Lactuca sativa
Lsat_1_v5_gn_2_110540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 189828075-189829074 Lactuca sativa
Lsat_1_v5_gn_2_110540 2.0kb upstream 2.0kb upstream 5145   true Lsat_1_v8_lg_2: 189829075-189834219 Lactuca sativa
Lsat_1_v5_gn_2_110540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 189832220-189834219 Lactuca sativa
Lsat_1_v5_gn_2_110540 2.0kb downstream 2.0kb downstream 5145   true Lsat_1_v8_lg_2: 189827075-189832219 Lactuca sativa
Lsat_1_v5_gn_2_110540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 189827075-189829074 Lactuca sativa
Lsat_1_v5_gn_2_110540 5.0kb upstream 5.0kb upstream 8145   true Lsat_1_v8_lg_2: 189829075-189837219 Lactuca sativa
Lsat_1_v5_gn_2_110540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 189832220-189837219 Lactuca sativa
Lsat_1_v5_gn_2_110540 5.0kb downstream 5.0kb downstream 8145   true Lsat_1_v8_lg_2: 189824075-189832219 Lactuca sativa
Lsat_1_v5_gn_2_110540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 189824075-189829074 Lactuca sativa
Lsat_1_v5_gn_2_110540 10.0kb upstream 10.0kb upstream 13145   true Lsat_1_v8_lg_2: 189829075-189842219 Lactuca sativa
Lsat_1_v5_gn_2_110540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 189832220-189842219 Lactuca sativa
Lsat_1_v5_gn_2_110540 10.0kb downstream 10.0kb downstream 13145   true Lsat_1_v8_lg_2: 189819075-189832219 Lactuca sativa
Lsat_1_v5_gn_2_110540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 189819075-189829074 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479228 5263 Asterids View MSA
123743872 5271 Pentapetalae View MSA
122795043 5272 Eudicot View MSA
122048276 5273 Angiosperm View MSA
121310915 5274 Embryophyte View MSA
123348289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain