Gene : Lsat_1_v5_gn_2_114040 L. sativa V8
Defline:  (1 of 2) PTHR32295//PTHR32295:SF32 - FAMILY NOT NAMED // PROTEIN IQ-DOMAIN 3-RELATED Genomic Order:  3362
Name:  ? Lsat_1_v5_gn_2_114040 Secondary Identifier:  ? PAC:38959871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_114040 0.5kb upstream 0.5kb upstream 3849   true Lsat_1_v8_lg_2: 193338693-193342541 Lactuca sativa
Lsat_1_v5_gn_2_114040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 193338693-193339192 Lactuca sativa
Lsat_1_v5_gn_2_114040 0.5kb downstream 0.5kb downstream 3849   true Lsat_1_v8_lg_2: 193339193-193343041 Lactuca sativa
Lsat_1_v5_gn_2_114040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 193342542-193343041 Lactuca sativa
Lsat_1_v5_gn_2_114040 1.0kb upstream 1.0kb upstream 4349   true Lsat_1_v8_lg_2: 193338193-193342541 Lactuca sativa
Lsat_1_v5_gn_2_114040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 193338193-193339192 Lactuca sativa
Lsat_1_v5_gn_2_114040 1.0kb downstream 1.0kb downstream 4349   true Lsat_1_v8_lg_2: 193339193-193343541 Lactuca sativa
Lsat_1_v5_gn_2_114040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 193342542-193343541 Lactuca sativa
Lsat_1_v5_gn_2_114040 2.0kb upstream 2.0kb upstream 5349   true Lsat_1_v8_lg_2: 193337193-193342541 Lactuca sativa
Lsat_1_v5_gn_2_114040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 193337193-193339192 Lactuca sativa
Lsat_1_v5_gn_2_114040 2.0kb downstream 2.0kb downstream 5349   true Lsat_1_v8_lg_2: 193339193-193344541 Lactuca sativa
Lsat_1_v5_gn_2_114040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 193342542-193344541 Lactuca sativa
Lsat_1_v5_gn_2_114040 5.0kb upstream 5.0kb upstream 8349   true Lsat_1_v8_lg_2: 193334193-193342541 Lactuca sativa
Lsat_1_v5_gn_2_114040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 193334193-193339192 Lactuca sativa
Lsat_1_v5_gn_2_114040 5.0kb downstream 5.0kb downstream 8349   true Lsat_1_v8_lg_2: 193339193-193347541 Lactuca sativa
Lsat_1_v5_gn_2_114040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 193342542-193347541 Lactuca sativa
Lsat_1_v5_gn_2_114040 10.0kb upstream 10.0kb upstream 13349   true Lsat_1_v8_lg_2: 193329193-193342541 Lactuca sativa
Lsat_1_v5_gn_2_114040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 193329193-193339192 Lactuca sativa
Lsat_1_v5_gn_2_114040 10.0kb downstream 10.0kb downstream 13349   true Lsat_1_v8_lg_2: 193339193-193352541 Lactuca sativa
Lsat_1_v5_gn_2_114040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 193342542-193352541 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473717 5263 Asterids View MSA
123743495 5271 Pentapetalae View MSA
122791469 5272 Eudicot View MSA
122044352 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain