Gene : Lsat_1_v5_gn_2_115780 L. sativa V8
Defline:  (1 of 14) PF05056 - Protein of unknown function (DUF674) (DUF674) Genomic Order:  3412
Name:  ? Lsat_1_v5_gn_2_115780 Secondary Identifier:  ? PAC:38956660
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_115780 0.5kb upstream 0.5kb upstream 1730   true Lsat_1_v8_lg_2: 195244849-195246578 Lactuca sativa
Lsat_1_v5_gn_2_115780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 195244849-195245348 Lactuca sativa
Lsat_1_v5_gn_2_115780 0.5kb downstream 0.5kb downstream 1730   true Lsat_1_v8_lg_2: 195245349-195247078 Lactuca sativa
Lsat_1_v5_gn_2_115780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 195246579-195247078 Lactuca sativa
Lsat_1_v5_gn_2_115780 1.0kb upstream 1.0kb upstream 2230   true Lsat_1_v8_lg_2: 195244349-195246578 Lactuca sativa
Lsat_1_v5_gn_2_115780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 195244349-195245348 Lactuca sativa
Lsat_1_v5_gn_2_115780 1.0kb downstream 1.0kb downstream 2230   true Lsat_1_v8_lg_2: 195245349-195247578 Lactuca sativa
Lsat_1_v5_gn_2_115780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 195246579-195247578 Lactuca sativa
Lsat_1_v5_gn_2_115780 2.0kb upstream 2.0kb upstream 3230   true Lsat_1_v8_lg_2: 195243349-195246578 Lactuca sativa
Lsat_1_v5_gn_2_115780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 195243349-195245348 Lactuca sativa
Lsat_1_v5_gn_2_115780 2.0kb downstream 2.0kb downstream 3230   true Lsat_1_v8_lg_2: 195245349-195248578 Lactuca sativa
Lsat_1_v5_gn_2_115780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 195246579-195248578 Lactuca sativa
Lsat_1_v5_gn_2_115780 5.0kb upstream 5.0kb upstream 6230   true Lsat_1_v8_lg_2: 195240349-195246578 Lactuca sativa
Lsat_1_v5_gn_2_115780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 195240349-195245348 Lactuca sativa
Lsat_1_v5_gn_2_115780 5.0kb downstream 5.0kb downstream 6230   true Lsat_1_v8_lg_2: 195245349-195251578 Lactuca sativa
Lsat_1_v5_gn_2_115780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 195246579-195251578 Lactuca sativa
Lsat_1_v5_gn_2_115780 10.0kb upstream 10.0kb upstream 11230   true Lsat_1_v8_lg_2: 195235349-195246578 Lactuca sativa
Lsat_1_v5_gn_2_115780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 195235349-195245348 Lactuca sativa
Lsat_1_v5_gn_2_115780 10.0kb downstream 10.0kb downstream 11230   true Lsat_1_v8_lg_2: 195245349-195256578 Lactuca sativa
Lsat_1_v5_gn_2_115780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 195246579-195256578 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029295 5273 Angiosperm View MSA
121476732 5263 Asterids View MSA
123752528 5271 Pentapetalae View MSA
122797868 5272 Eudicot View MSA
121350471 5274 Embryophyte View MSA
123381749 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain