Gene : Lsat_1_v5_gn_2_4580 L. sativa V8
Defline:  (1 of 1) K12385 - Niemann-Pick C1 protein (NPC1) Genomic Order:  111
Name:  ? Lsat_1_v5_gn_2_4580 Secondary Identifier:  ? PAC:38959274
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_4580 0.5kb upstream 0.5kb upstream 32041   true Lsat_1_v8_lg_2: 9014376-9046416 Lactuca sativa
Lsat_1_v5_gn_2_4580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 9014376-9014875 Lactuca sativa
Lsat_1_v5_gn_2_4580 0.5kb downstream 0.5kb downstream 32041   true Lsat_1_v8_lg_2: 9014876-9046916 Lactuca sativa
Lsat_1_v5_gn_2_4580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 9046417-9046916 Lactuca sativa
Lsat_1_v5_gn_2_4580 1.0kb upstream 1.0kb upstream 32541   true Lsat_1_v8_lg_2: 9013876-9046416 Lactuca sativa
Lsat_1_v5_gn_2_4580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 9013876-9014875 Lactuca sativa
Lsat_1_v5_gn_2_4580 1.0kb downstream 1.0kb downstream 32541   true Lsat_1_v8_lg_2: 9014876-9047416 Lactuca sativa
Lsat_1_v5_gn_2_4580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 9046417-9047416 Lactuca sativa
Lsat_1_v5_gn_2_4580 2.0kb upstream 2.0kb upstream 33541   true Lsat_1_v8_lg_2: 9012876-9046416 Lactuca sativa
Lsat_1_v5_gn_2_4580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 9012876-9014875 Lactuca sativa
Lsat_1_v5_gn_2_4580 2.0kb downstream 2.0kb downstream 33541   true Lsat_1_v8_lg_2: 9014876-9048416 Lactuca sativa
Lsat_1_v5_gn_2_4580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 9046417-9048416 Lactuca sativa
Lsat_1_v5_gn_2_4580 5.0kb upstream 5.0kb upstream 36541   true Lsat_1_v8_lg_2: 9009876-9046416 Lactuca sativa
Lsat_1_v5_gn_2_4580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 9009876-9014875 Lactuca sativa
Lsat_1_v5_gn_2_4580 5.0kb downstream 5.0kb downstream 36541   true Lsat_1_v8_lg_2: 9014876-9051416 Lactuca sativa
Lsat_1_v5_gn_2_4580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 9046417-9051416 Lactuca sativa
Lsat_1_v5_gn_2_4580 10.0kb upstream 10.0kb upstream 41541   true Lsat_1_v8_lg_2: 9004876-9046416 Lactuca sativa
Lsat_1_v5_gn_2_4580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 9004876-9014875 Lactuca sativa
Lsat_1_v5_gn_2_4580 10.0kb downstream 10.0kb downstream 41541   true Lsat_1_v8_lg_2: 9014876-9056416 Lactuca sativa
Lsat_1_v5_gn_2_4580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 9046417-9056416 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470108 5263 Asterids View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain