Gene : Lsat_1_v5_gn_2_61140 L. sativa V8
Defline:  (1 of 6) PTHR31651//PTHR31651:SF5 - FAMILY NOT NAMED // AUXIN EFFLUX CARRIER FAMILY PROTEIN-RELATED Genomic Order:  1570
Name:  ? Lsat_1_v5_gn_2_61140 Secondary Identifier:  ? PAC:38957493
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_61140 0.5kb upstream 0.5kb upstream 3595   true Lsat_1_v8_lg_2: 130158043-130161637 Lactuca sativa
Lsat_1_v5_gn_2_61140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 130161138-130161637 Lactuca sativa
Lsat_1_v5_gn_2_61140 0.5kb downstream 0.5kb downstream 3595   true Lsat_1_v8_lg_2: 130157543-130161137 Lactuca sativa
Lsat_1_v5_gn_2_61140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 130157543-130158042 Lactuca sativa
Lsat_1_v5_gn_2_61140 1.0kb upstream 1.0kb upstream 4095   true Lsat_1_v8_lg_2: 130158043-130162137 Lactuca sativa
Lsat_1_v5_gn_2_61140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 130161138-130162137 Lactuca sativa
Lsat_1_v5_gn_2_61140 1.0kb downstream 1.0kb downstream 4095   true Lsat_1_v8_lg_2: 130157043-130161137 Lactuca sativa
Lsat_1_v5_gn_2_61140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 130157043-130158042 Lactuca sativa
Lsat_1_v5_gn_2_61140 2.0kb upstream 2.0kb upstream 5095   true Lsat_1_v8_lg_2: 130158043-130163137 Lactuca sativa
Lsat_1_v5_gn_2_61140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 130161138-130163137 Lactuca sativa
Lsat_1_v5_gn_2_61140 2.0kb downstream 2.0kb downstream 5095   true Lsat_1_v8_lg_2: 130156043-130161137 Lactuca sativa
Lsat_1_v5_gn_2_61140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 130156043-130158042 Lactuca sativa
Lsat_1_v5_gn_2_61140 5.0kb upstream 5.0kb upstream 8095   true Lsat_1_v8_lg_2: 130158043-130166137 Lactuca sativa
Lsat_1_v5_gn_2_61140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 130161138-130166137 Lactuca sativa
Lsat_1_v5_gn_2_61140 5.0kb downstream 5.0kb downstream 8095   true Lsat_1_v8_lg_2: 130153043-130161137 Lactuca sativa
Lsat_1_v5_gn_2_61140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 130153043-130158042 Lactuca sativa
Lsat_1_v5_gn_2_61140 10.0kb upstream 10.0kb upstream 13095   true Lsat_1_v8_lg_2: 130158043-130171137 Lactuca sativa
Lsat_1_v5_gn_2_61140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 130161138-130171137 Lactuca sativa
Lsat_1_v5_gn_2_61140 10.0kb downstream 10.0kb downstream 13095   true Lsat_1_v8_lg_2: 130148043-130161137 Lactuca sativa
Lsat_1_v5_gn_2_61140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 130148043-130158042 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026446 5273 Angiosperm View MSA
121474186 5263 Asterids View MSA
123751038 5271 Pentapetalae View MSA
122794652 5272 Eudicot View MSA
123429004 5275 Viridiplantae View MSA
121349316 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain