Gene : Lsat_1_v5_gn_2_65621 L. sativa V8
Defline:  (1 of 1) PTHR22849//PTHR22849:SF9 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1791
Name:  ? Lsat_1_v5_gn_2_65621 Secondary Identifier:  ? PAC:38959515
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_65621 0.5kb upstream 0.5kb upstream 1935   true Lsat_1_v8_lg_2: 139582751-139584685 Lactuca sativa
Lsat_1_v5_gn_2_65621 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 139582751-139583250 Lactuca sativa
Lsat_1_v5_gn_2_65621 0.5kb downstream 0.5kb downstream 1935   true Lsat_1_v8_lg_2: 139583251-139585185 Lactuca sativa
Lsat_1_v5_gn_2_65621 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 139584686-139585185 Lactuca sativa
Lsat_1_v5_gn_2_65621 1.0kb upstream 1.0kb upstream 2435   true Lsat_1_v8_lg_2: 139582251-139584685 Lactuca sativa
Lsat_1_v5_gn_2_65621 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 139582251-139583250 Lactuca sativa
Lsat_1_v5_gn_2_65621 1.0kb downstream 1.0kb downstream 2435   true Lsat_1_v8_lg_2: 139583251-139585685 Lactuca sativa
Lsat_1_v5_gn_2_65621 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 139584686-139585685 Lactuca sativa
Lsat_1_v5_gn_2_65621 2.0kb upstream 2.0kb upstream 3435   true Lsat_1_v8_lg_2: 139581251-139584685 Lactuca sativa
Lsat_1_v5_gn_2_65621 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 139581251-139583250 Lactuca sativa
Lsat_1_v5_gn_2_65621 2.0kb downstream 2.0kb downstream 3435   true Lsat_1_v8_lg_2: 139583251-139586685 Lactuca sativa
Lsat_1_v5_gn_2_65621 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 139584686-139586685 Lactuca sativa
Lsat_1_v5_gn_2_65621 5.0kb upstream 5.0kb upstream 6435   true Lsat_1_v8_lg_2: 139578251-139584685 Lactuca sativa
Lsat_1_v5_gn_2_65621 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 139578251-139583250 Lactuca sativa
Lsat_1_v5_gn_2_65621 5.0kb downstream 5.0kb downstream 6435   true Lsat_1_v8_lg_2: 139583251-139589685 Lactuca sativa
Lsat_1_v5_gn_2_65621 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 139584686-139589685 Lactuca sativa
Lsat_1_v5_gn_2_65621 10.0kb upstream 10.0kb upstream 11435   true Lsat_1_v8_lg_2: 139573251-139584685 Lactuca sativa
Lsat_1_v5_gn_2_65621 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 139573251-139583250 Lactuca sativa
Lsat_1_v5_gn_2_65621 10.0kb downstream 10.0kb downstream 11435   true Lsat_1_v8_lg_2: 139583251-139594685 Lactuca sativa
Lsat_1_v5_gn_2_65621 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 139584686-139594685 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473176 5263 Asterids View MSA
123744256 5271 Pentapetalae View MSA
122789600 5272 Eudicot View MSA
122042359 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain