Gene : Lsat_1_v5_gn_2_37340 L. sativa V8
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Genomic Order:  995
Name:  ? Lsat_1_v5_gn_2_37340 Secondary Identifier:  ? PAC:38961331
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_37340 0.5kb upstream 0.5kb upstream 1722   true Lsat_1_v8_lg_2: 89196182-89197903 Lactuca sativa
Lsat_1_v5_gn_2_37340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 89196182-89196681 Lactuca sativa
Lsat_1_v5_gn_2_37340 0.5kb downstream 0.5kb downstream 1722   true Lsat_1_v8_lg_2: 89196682-89198403 Lactuca sativa
Lsat_1_v5_gn_2_37340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 89197904-89198403 Lactuca sativa
Lsat_1_v5_gn_2_37340 1.0kb upstream 1.0kb upstream 2222   true Lsat_1_v8_lg_2: 89195682-89197903 Lactuca sativa
Lsat_1_v5_gn_2_37340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 89195682-89196681 Lactuca sativa
Lsat_1_v5_gn_2_37340 1.0kb downstream 1.0kb downstream 2222   true Lsat_1_v8_lg_2: 89196682-89198903 Lactuca sativa
Lsat_1_v5_gn_2_37340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 89197904-89198903 Lactuca sativa
Lsat_1_v5_gn_2_37340 2.0kb upstream 2.0kb upstream 3222   true Lsat_1_v8_lg_2: 89194682-89197903 Lactuca sativa
Lsat_1_v5_gn_2_37340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 89194682-89196681 Lactuca sativa
Lsat_1_v5_gn_2_37340 2.0kb downstream 2.0kb downstream 3222   true Lsat_1_v8_lg_2: 89196682-89199903 Lactuca sativa
Lsat_1_v5_gn_2_37340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 89197904-89199903 Lactuca sativa
Lsat_1_v5_gn_2_37340 5.0kb upstream 5.0kb upstream 6222   true Lsat_1_v8_lg_2: 89191682-89197903 Lactuca sativa
Lsat_1_v5_gn_2_37340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 89191682-89196681 Lactuca sativa
Lsat_1_v5_gn_2_37340 5.0kb downstream 5.0kb downstream 6222   true Lsat_1_v8_lg_2: 89196682-89202903 Lactuca sativa
Lsat_1_v5_gn_2_37340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 89197904-89202903 Lactuca sativa
Lsat_1_v5_gn_2_37340 10.0kb upstream 10.0kb upstream 11222   true Lsat_1_v8_lg_2: 89186682-89197903 Lactuca sativa
Lsat_1_v5_gn_2_37340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 89186682-89196681 Lactuca sativa
Lsat_1_v5_gn_2_37340 10.0kb downstream 10.0kb downstream 11222   true Lsat_1_v8_lg_2: 89196682-89207903 Lactuca sativa
Lsat_1_v5_gn_2_37340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 89197904-89207903 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474523 5263 Asterids View MSA
123740594 5271 Pentapetalae View MSA
122785739 5272 Eudicot View MSA
122043742 5273 Angiosperm View MSA
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain