Gene : Lsat_1_v5_gn_2_40740 L. sativa V8
Defline:  (1 of 3) PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN Genomic Order:  1083
Name:  ? Lsat_1_v5_gn_2_40740 Secondary Identifier:  ? PAC:38958371
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_40740 0.5kb upstream 0.5kb upstream 2659   true Lsat_1_v8_lg_2: 96237231-96239889 Lactuca sativa
Lsat_1_v5_gn_2_40740 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 96237231-96237730 Lactuca sativa
Lsat_1_v5_gn_2_40740 0.5kb downstream 0.5kb downstream 2659   true Lsat_1_v8_lg_2: 96237731-96240389 Lactuca sativa
Lsat_1_v5_gn_2_40740 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 96239890-96240389 Lactuca sativa
Lsat_1_v5_gn_2_40740 1.0kb upstream 1.0kb upstream 3159   true Lsat_1_v8_lg_2: 96236731-96239889 Lactuca sativa
Lsat_1_v5_gn_2_40740 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 96236731-96237730 Lactuca sativa
Lsat_1_v5_gn_2_40740 1.0kb downstream 1.0kb downstream 3159   true Lsat_1_v8_lg_2: 96237731-96240889 Lactuca sativa
Lsat_1_v5_gn_2_40740 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 96239890-96240889 Lactuca sativa
Lsat_1_v5_gn_2_40740 2.0kb upstream 2.0kb upstream 4159   true Lsat_1_v8_lg_2: 96235731-96239889 Lactuca sativa
Lsat_1_v5_gn_2_40740 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 96235731-96237730 Lactuca sativa
Lsat_1_v5_gn_2_40740 2.0kb downstream 2.0kb downstream 4159   true Lsat_1_v8_lg_2: 96237731-96241889 Lactuca sativa
Lsat_1_v5_gn_2_40740 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 96239890-96241889 Lactuca sativa
Lsat_1_v5_gn_2_40740 5.0kb upstream 5.0kb upstream 7159   true Lsat_1_v8_lg_2: 96232731-96239889 Lactuca sativa
Lsat_1_v5_gn_2_40740 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 96232731-96237730 Lactuca sativa
Lsat_1_v5_gn_2_40740 5.0kb downstream 5.0kb downstream 7159   true Lsat_1_v8_lg_2: 96237731-96244889 Lactuca sativa
Lsat_1_v5_gn_2_40740 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 96239890-96244889 Lactuca sativa
Lsat_1_v5_gn_2_40740 10.0kb upstream 10.0kb upstream 12159   true Lsat_1_v8_lg_2: 96227731-96239889 Lactuca sativa
Lsat_1_v5_gn_2_40740 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 96227731-96237730 Lactuca sativa
Lsat_1_v5_gn_2_40740 10.0kb downstream 10.0kb downstream 12159   true Lsat_1_v8_lg_2: 96237731-96249889 Lactuca sativa
Lsat_1_v5_gn_2_40740 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 96239890-96249889 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476575 5263 Asterids View MSA
123739151 5271 Pentapetalae View MSA
122796554 5272 Eudicot View MSA
122051532 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351338 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain